PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43120.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 337aa    MW: 37700.4 Da    PI: 9.7401
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.81.6e-1430122187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 +W+++ + +L+ea  ++  +l+rg+l++++W+ev++++     ++g+  +r+ +qCk++++ l+k+yk +k++  + +   +s +p+f +l+a
  PON43120.1  30 CWSEEATSTLVEAWGDRYLALKRGNLRQQHWQEVADAVnsdhGDGGVrsRRTDIQCKNRIDTLKKKYKIEKARVFESEGSYVSAWPFFARLDA 122
                 7**************************************999555554489*********************99998888899*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDSDAETPSP AATRRTRTTP FSGSGGREDC WSEEATSTLV EAWGDRYLAL KRGNLRQQHW  60
QEVADAVNSD HGDGGVRSRR TDIQCKNRID TLKKKYKIEK ARVFESEGSY VSAWPFFARL  120
DALIGKKYPM SKVFSPPAVA GVNRNPSPPS WARYSPVPVG PRSATQKRPA PSPATAPLGG  180
DYSGSQRNFS VFAEAAVAAL EEEEVDNEDT DRSGSRSSTG SRRRNREGEP LYRGLAKAIE  240
RFGEIYERVE AAKQRQMVEL EKQRMQFAKD LEFQRMQLFM ETQVQLQKIK RAKRSSGNGE  300
SLVLFFPLFY SVGVLELFHC LVFGHAGNTI VSQLGHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-77Trihelix family protein