PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42982.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 501aa MW: 55204.4 Da PI: 6.76

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	166	215	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON42982.1 166 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 215 78*****************......55**********************997 PP
2	AP2	43.8	6.3e-14	258	308	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g PON42982.1 258 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 308 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MWDLNDCPDQ SRRDDESEGC SSQKTSVDGD DEKGKRVGSV SNSSSSAVVV EDGSDEEYGG 60 ARIKRRGSKI FGFSVNHDDE DCSNMDTDPP PVTRNFFPVD DSEMAVGPTS AGDGGGVGVD 120 GFPRAHWVGV RFCQSDSMGT GPGKSASVEV SQPMKKSRRG PRSRSSQYRG VTFYRRTGRW 180 ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFSLEDYEED MKQMSNLTKE 240 EFVHVLRRQS TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEIEAARAYD 300 KAAIKCNGKD AVTNFDPSIY ESELNSPDQS SSSPGNGNAA DHNLDLSLGN STSNKQNNSV 360 LMSTIGNNSQ NAGLMEQHSP SMAFETDWRN PGFRPKVNGS DSLRRDGYLE TETMQLLSRT 420 HLQSHGYGTN HHGQFRRPGD HTHIPSSYPP NHHHHFPSSS NGGRINAHNI NGNDHLGPMA 480 LQFFPTNSCN CCSIIRIPTA D

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MWDLNDCPDQ SRRDDESEGC SSQKTSVDGD DEKGKRVGSV SNSSSSAVVV EDGSDEEYGG  60
ARIKRRGSKI FGFSVNHDDE DCSNMDTDPP PVTRNFFPVD DSEMAVGPTS AGDGGGVGVD  120
GFPRAHWVGV RFCQSDSMGT GPGKSASVEV SQPMKKSRRG PRSRSSQYRG VTFYRRTGRW  180
ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFSLEDYEED MKQMSNLTKE  240
EFVHVLRRQS TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEIEAARAYD  300
KAAIKCNGKD AVTNFDPSIY ESELNSPDQS SSSPGNGNAA DHNLDLSLGN STSNKQNNSV  360
LMSTIGNNSQ NAGLMEQHSP SMAFETDWRN PGFRPKVNGS DSLRRDGYLE TETMQLLSRT  420
HLQSHGYGTN HHGQFRRPGD HTHIPSSYPP NHHHHFPSSS NGGRINAHNI NGNDHLGPMA  480
LQFFPTNSCN CCSIIRIPTA D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-128	AP2 family protein