PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON42924.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 23482.5 Da PI: 8.6538 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 67.2 | 1.6e-21 | 9 | 42 | 1 | 34 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdae 34 krienk+nrqvtf+kRrng+lKKA+ELSvLCdae PON42924.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE 42 79******************************98 PP | |||||||
2 | K-box | 92.9 | 5.5e-31 | 41 | 127 | 14 | 100 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 aes+++e+ kLk++ e+Lqr+qR+llGedL++L+ keL+q+e+qLe+slk++Rs+K++++l+q+ +lq +e++l e+n+aL+ kl+e PON42924.1 41 AESSYREYLKLKNRFESLQRTQRNLLGEDLGPLNTKELEQIERQLESSLKQVRSTKTQYMLDQLTDLQGREHMLIEANRALTIKLDE 127 58999****************************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AESSYREYLK LKNRFESLQR 60 TQRNLLGEDL GPLNTKELEQ IERQLESSLK QVRSTKTQYM LDQLTDLQGR EHMLIEANRA 120 LTIKLDEISS RNNYRQSWEV NDHDQQQTIS YGQQHGESQG LIFQPLDCNP TLQIGYNVAV 180 SEQMNTPSHG QQVNGFIPGW ML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 4e-88 | MIKC_MADS family protein |