PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42921.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 303aa MW: 34741.3 Da PI: 9.3207

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62	1.2e-19	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v++ G g+W+++ar+ g++R++k+c++rw +yl PON42921.1 17 KGPWTPEEDKLLTEYVNLNGEGRWSSVARCAGLNRSGKSCRLRWVNYL 64 79********************************************97 PP
2	Myb_DNA-binding	50.3	5.3e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ PON42921.1 70 RGQITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNFWRTH 114 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MVSAMGRGIQ EHQGWRKGPW TPEEDKLLTE YVNLNGEGRW SSVARCAGLN RSGKSCRLRW 60 VNYLRPGLKR GQITPQEEGI IIELHALWGN KWSTIARYLP GRTDNEIKNF WRTHFKKKEK 120 SSRKQQKRRS QLLKEQKPQK GHNNHHDHDD HHDQLPGRVA AMDGADQTKT NQDIDHQARD 180 VTIKHENMAL TNNPSSDQNI NGSHNQIIQS SLPPVMYQDD AVSYSWSDTT ADQEYYGLWG 240 GLWDLVDQQY GRTNNNNNNN QGTAANYYYY GAAGDHIINH SNKNIIPIQN QARAFSSYGG 300 VFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	1e-64	MYB family protein