PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42919.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 447aa    MW: 49322.4 Da    PI: 7.7828
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.11.3e-95554441373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshlta 98 
                 l++lLl+cA++ +sg+l+ a+++L+++s+las +gd+mqRl a f+ ALa  l++ +++l kal+ ++ ++ +    +la+ +    ++P+l f++ + 
  PON42919.1  55 LIQLLLNCAKHAASGNLRHADSCLSQISQLASVNGDSMQRLSARFASALAVSLVKRWPGLHKALNRTQRPKLElGPAQLASPSSSPAAFPCLGFAYAII 153
                 689*************************************************************8888887666788888888899************* PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  ++++ +v++e ++H +Df+      W++++++Las p  +gpp sl  T v+     +k  l ++g  L+k Ae+lg++f++n+l + +l +l++e +
  PON42919.1 154 ARTLVHSVSHEGAIHFVDFGSCDSRLWVPIFRSLASEPrgHGPPlSLSFTCVHG----DKAVLDKLGLGLTKEAESLGLSFQYNAL-HVSLGELTTEVI 247
                 ***********************************9887766777*********....9**************************6.778********* PP

        GRAS 195 rvkpgEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                 +++p+Eala+ ++l+lh ll              ++  +  ++ +++L +vks+sPkvv +veqeadhn +++++rfl +l+yysa+fdsl+a++++ s
  PON42919.1 248 KTRPEEALAIVSILSLHVLLaeddrvdakfgarkNKGIKECKQMSRFLAMVKSMSPKVVLLVEQEADHNLNRLVDRFLGSLHYYSAVFDSLDANFGASS 346
                 *******************************987555555558889************************************************88776 PP

        GRAS 280 .....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      +er   E++  grei+n+vaceg er+erhe++ekW +r+++aGF+p+++  + +++ak +l+ ++s+gy+v ++++s+vl+W++rpL++vSaW
  PON42919.1 347 sssdhQERLAFEEM-YGREIENIVACEGLERVERHERYEKWMARFGRAGFRPIRMWFDPTEDAKKMLEVCGSEGYKVVNNKASFVLCWHKRPLYAVSAW 444
                 67777999999999.9*********************************************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MSSLPPLSTK PDVTLSLNFS PSSTTSFSSP DDHDQLQTTS SSSSLTMPEE RGIVLIQLLL  60
NCAKHAASGN LRHADSCLSQ ISQLASVNGD SMQRLSARFA SALAVSLVKR WPGLHKALNR  120
TQRPKLELGP AQLASPSSSP AAFPCLGFAY AIIARTLVHS VSHEGAIHFV DFGSCDSRLW  180
VPIFRSLASE PRGHGPPLSL SFTCVHGDKA VLDKLGLGLT KEAESLGLSF QYNALHVSLG  240
ELTTEVIKTR PEEALAIVSI LSLHVLLAED DRVDAKFGAR KNKGIKECKQ MSRFLAMVKS  300
MSPKVVLLVE QEADHNLNRL VDRFLGSLHY YSAVFDSLDA NFGASSSSSD HQERLAFEEM  360
YGREIENIVA CEGLERVERH ERYEKWMARF GRAGFRPIRM WFDPTEDAKK MLEVCGSEGY  420
KVVNNKASFV LCWHKRPLYA VSAWICQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.12e-86GRAS family protein