PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON42821.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GRF

Protein Properties

Length: 424aa MW: 45653.7 Da PI: 8.7102

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON42821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.5	7.3e-26	164	208	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v+ g+k+CErH+hrgrsrsrk++e+ PON42821.1 164 DPEPGRCRRTDGKKWRCSRDVVVGQKYCERHMHRGRSRSRKPVES 208 79****************************************986 PP
2	QLQ	52.3	1.7e-18	89	125	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ aQ+q+L+ Q+l+++y++a++ vPpeLlq+i+k PON42821.1 89 SYFSLAQWQELELQALIFRYMLAGAAVPPELLQPIKK 125 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDFHLKQWRN QQYESEHHQQ QHSAKIPKLV SETHHKKPDP SSSGFEPLPL FVPEPNTKMI 60 TSSGTLSAFP ADSTTPTAST TRIIPRMGSY FSLAQWQELE LQALIFRYML AGAAVPPELL 120 QPIKKSISLQ TPYFLHQSLQ PYPHYQPSPA ALFQSGYWGR AAMDPEPGRC RRTDGKKWRC 180 SRDVVVGQKY CERHMHRGRS RSRKPVESPT PAGGRLAGSC AGGGGGALAS NTTHPIATAP 240 PPLSTSSAGT HFSLSGPSSS SIDLLHLNQS SSDVKSENKD LFETHNGVSG DGKSDGHILR 300 HFFDDWPRSL EEPDNGGGSN NNNNRSPLNS ATSLSISIPG NSSSDVSLKL STGDGKEPGQ 360 RPEAHSDRGQ PQLGWAAGWA SNPMASMGGP LAEALRSSNS NSSPTSVLHQ LPRGSAADPC 420 IVSS

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDFHLKQWRN QQYESEHHQQ QHSAKIPKLV SETHHKKPDP SSSGFEPLPL FVPEPNTKMI  60
TSSGTLSAFP ADSTTPTAST TRIIPRMGSY FSLAQWQELE LQALIFRYML AGAAVPPELL  120
QPIKKSISLQ TPYFLHQSLQ PYPHYQPSPA ALFQSGYWGR AAMDPEPGRC RRTDGKKWRC  180
SRDVVVGQKY CERHMHRGRS RSRKPVESPT PAGGRLAGSC AGGGGGALAS NTTHPIATAP  240
PPLSTSSAGT HFSLSGPSSS SIDLLHLNQS SSDVKSENKD LFETHNGVSG DGKSDGHILR  300
HFFDDWPRSL EEPDNGGGSN NNNNRSPLNS ATSLSISIPG NSSSDVSLKL STGDGKEPGQ  360
RPEAHSDRGQ PQLGWAAGWA SNPMASMGGP LAEALRSSNS NSSPTSVLHQ LPRGSAADPC  420
IVSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-62	GRF family protein