PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON42790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 231aa MW: 24790.2 Da PI: 7.0482 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00032 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C + F ++ L H++ H PON42790.1 69 YECQYCFREFANSQALGGHQNAH 91 99******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MTATGASAAV PPLKLFGFSI SDDNDNVDHQ LDQTSKSTPG STTQNNDDRS DDSVTTLKPT 60 NDVVGHHKYE CQYCFREFAN SQALGGHQNA HKKERQLMKR AQTQATSSNT ATTARNYALA 120 NISHVSGFMS PHLLDLAAAQ PSSWYYMAPQ YAPALHMSSH GGGSHHLSRT NSMPGRRVYH 180 GEATALGALS DGVLYDNSQV FLGETSTNNV TRHPDKGLGL DLHLGLGPAG P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58070.1 | 1e-14 | C2H2 family protein |