PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42514.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 208aa    MW: 23096.6 Da    PI: 7.5755
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.1e-1068108954
                 HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  r RR+ri ++f  L++l+P  a      K++ +++Le+A++Y+k L
  PON42514.1  68 ARERRHRISDRFKILQSLVPGgA------KMDTVSMLEEAIHYVKFL 108
                 699*****************966......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDYFPSTTTT TTQYSSSSRS FGGSNKTKKK GNNVNINGNE RSTTSSSKGG GGGGGGVKLS  60
TDPQSVAARE RRHRISDRFK ILQSLVPGGA KMDTVSMLEE AIHYVKFLKT QIWLHQTMIN  120
YVDDVDDLPT AASTLFVTPP DYSVPPYHHH HHHHRQLTDH HHHHHLCGAQ NPVLQTQPEA  180
PIIPTLPPES CFDQSHDQAT SSDDFMRF