PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON42093.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YA
Protein Properties Length: 330aa    MW: 36256.9 Da    PI: 9.8208
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON42093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.66.7e-31157214158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRaklee.ekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 d p+YVNaKQy++I++RRq+Rak++  e+k+  k rkpy+heSRh hA+rRpRg+gGrF
  PON42093.1 157 DGPIYVNAKQYHGIIRRRQSRAKAAVlENKI-PKVRKPYMHESRHLHAMRRPRGCGGRF 214
                 57**********************9879999.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAMQTIYFKE HEGLVPNTIG QLSSIPPGPW WSAFGTQSVF GDSCGQLKPL SMEQPGAGDQ  60
LISTKHAGRG TDLLPDKGNT TQFTIFPGDY KFSGDGQKTQ ATISLQSSLP EYHARFELGF  120
GQPMVCAKYP YIDQFCGILS YGHSGRIMLP LNLTADDGPI YVNAKQYHGI IRRRQSRAKA  180
AVLENKIPKV RKPYMHESRH LHAMRRPRGC GGRFLNTKNL NNDKGGGPEA KKLGNGHQLS  240
RPSRSQSSEV LQSESGTLNS SKEANNSSGS NISGSEVTSM YSRGDLDRFQ INPLTSSFHS  300
LSDMMENSRG MVMPTKWIAA ADHSRCNIKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-64NF-YA family protein