PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41948.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family TCP
Protein Properties Length: 375aa    MW: 39885.8 Da    PI: 6.8318
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1142e-3522106266
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................s 66 
                 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++                    +
  PON41948.1  22 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLAELppwhptgnpatepdphaaaaG 106
                 79**************************************************************888876665544333333220 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MGMKGVGGEI VQVQGGHIVR STGRKDRHSK VYTAKGPRDR RVRLSAHTAI QFYDVQDRLG  60
YDRPSKAVDW LIKKAKTAID KLAELPPWHP TGNPATEPDP HAAAAGGPAK MGIAVEQSES  120
SGYNFQLHRQ MGTTENPDNG SGFIPPQALD SDAIADTMKS FFPTSSATSS MNFQTYPTDI  180
IRRAADPTQD LGLSLHSFHD HAMVHGQSQG GGGGGGADHA LPHDHHHHGL FVSGSGPVGY  240
GSGYQRMLAW GGDEGGENRG FGFGSAPAPP LQQDALLGQG STAPFSTQRG TLQSSFSPLV  300
RAWDDLPMAS QRPQPMHHSS SSLSSSSSIF GTRFTSDGSP VFCIPARIHG EDDDDEHGVV  360
SERPSSSSSP NSNHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.23e-56TCP family protein