PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41658.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 854aa    MW: 92633.6 Da    PI: 6.2477
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.57.1e-21137192156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+++l+L++rqVk+WFqNrR+++k
  PON41658.1 137 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLSLETRQVKFWFQNRRTQMK 192
                 688999***********************************************999 PP
2START202.81.5e-633425661206
                 HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
       START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                 ela+ a++elvk+a+ +ep+W +s    e  n++e++++f++s +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t++vis+
  PON41658.1 342 ELALGAMDELVKMAQTDEPLWIRSLggrEVFNQEEYMRSFTPSIGmkpngFVTEASRETGIVIINSLALVETLMDSN-RWAEMFPcviaRTSTTDVISN 439
                 57899********************999999************99********************************.********************* PP

                 T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 g      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  ++ ++  + +  +++lpSg+++++++ g+skvtwveh++++++++h
  PON41658.1 440 GmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSSgPAAFLNCRRLPSGCVVQDMPSGYSKVTWVEHAEYDESQVH 538
                 ******************************************************9999999************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +++r+l++sg+ +ga++wvatlqrqce+
  PON41658.1 539 QIYRPLLSSGMGFGAQRWVATLQRQCEC 566
                 **************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 854 aa     Download sequence    
MSFGGFLDNS TSTTGGGGGG ARLVPEIPYS SSNDNIGNGN DINHTNTISI MPSTAIAQPR  60
LVTQSLTKSM FNSPGLSLAL QTNIDGQGEI IRNMAESFEP GSGRRSRDEE HESRSGSDNM  120
DGGSGDDQDA ADKPPRKKRY HRHTPQQIQE LEALFKECPH PDEKQRLELS RRLSLETRQV  180
KFWFQNRRTQ MKTQLERHEN SLLRQENDKL RAENMSIRDA MRNPMCTNCG GPAIIGEISV  240
EEQHLRIENA RLKDELERVC ALAGKFLGRP ISALATSMAP PLPNSALELG VGSNGFGGLN  300
TVATTMPDFG ISSNTLTVLP PSRPPAGVQV LDRSIERSMY LELALGAMDE LVKMAQTDEP  360
LWIRSLGGRE VFNQEEYMRS FTPSIGMKPN GFVTEASRET GIVIINSLAL VETLMDSNRW  420
AEMFPCVIAR TSTTDVISNG MGGTRNGALQ LMHAELQVLS PLVPVREVNF LRFCKQHAEG  480
VWAVVDVSID TIRETSSGPA AFLNCRRLPS GCVVQDMPSG YSKVTWVEHA EYDESQVHQI  540
YRPLLSSGMG FGAQRWVATL QRQCECLAIL MSSTVPTRDH TAGITASGRR SMLKLAQRMT  600
DNFCAGVCAS TVHKWNKLNA GNVDEDVRVM TRKSVDDPGE PPGVVLSAAT SVWLPVSPQR  660
LFDFLRDERL RSEWDILSNG GPMQEMAHIA KGQDHGNCVS LLRASPMNTN QTSMLILQET  720
CIDAAGSLVV YAPVDIPAMH VVMNGGDSAY VALLPSGFAI VPDGPGFRGP MASTANGGGS  780
NKHNNSNNDG NGSNGNGSGG DGPHRAGGSL LTVAFQILVN SRPTAKLTVE SVETVNNLIS  840
CTVQKIKAAL QCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein