PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON41479.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family E2F/DP
Protein Properties Length: 352aa    MW: 38736 Da    PI: 5.6749
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON41479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-2799181271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PON41479.1  99 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgsgvttpdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 181
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MGNRTQQPSR AEEDDDLPGL GTTTTTTTTT TVSGQSVSMS GSVGSPSSRS EQTMATPASE  60
NTFLRLNHLD IHGDDAGSQG AVGSKKKKRG QRAVGGDKSG RGLRQFSMKV CEKVESKGRT  120
TYNEVADELV AEFADPGSGV TTPDQQQYDE KNIRRRVYDA LNVLMAMDII SKDKKEIQWK  180
GLPRTSLNDI EELKTERIGL RNRIEKKTAY LQELEEQYVG LQNLIQRNEQ LYSSGNAPSG  240
GVALPFILVQ TRPHATVEVE ISEDMQLVHF DFNSTPFELH DDNYVLKAMN FCETPQGDDV  300
AHNFSADGGE GSSRSSMYQT QISLPSMSNT PVRNPTSPPL PGILKARVKH EH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-156E2F/DP family protein