PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON41214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 26093.9 Da PI: 10.2467 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.2 | 5.1e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl e++s PON41214.1 10 RIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLNEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 86.6 | 4.9e-29 | 76 | 171 | 3 | 98 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ +++ e ++++l+qe+a + +ie L+ ++R++lGe+L+s+sl+eLqq+eqqL+ks++kiR++Kn++++eqie+l++kek l +en +L++k+ PON41214.1 76 NQANNKSVEPNMQHLKQEAAAMMTKIELLEISKRKFLGEGLGSCSLEELQQVEQQLQKSVSKIRARKNQVFREQIEQLKEKEKVLISENARLSEKY 171 45566689999*********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MVRGKTQMRR IENPTSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLNEFASS 60 SMQATVERYR RHTKDNQANN KSVEPNMQHL KQEAAAMMTK IELLEISKRK FLGEGLGSCS 120 LEELQQVEQQ LQKSVSKIRA RKNQVFREQI EQLKEKEKVL ISENARLSEK YGIKPIQALN 180 NQTENLDNTE SNPSSDVETE LFIGLPETRL KRLPSKNCRD ETHIKHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-83 | MIKC_MADS family protein |