PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON41212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28617.5 Da PI: 9.1536 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.5 | 2.8e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaevavi fss+gklye+ PON41212.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVAVICFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 98.9 | 7.6e-33 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e++++s+++e++kLk+++e+Lqr+qR+llGedL++L++keLq+Le+qLe +l + R++K+++++eq+e+l+kke++l + n++L+ kle PON41212.1 81 SIERETQSWYHEVTKLKSKYESLQRTQRNLLGEDLGPLDVKELQNLEKQLEGALAQARQRKMQIMTEQVEDLRKKERQLGDLNTQLKLKLE 171 457789*********************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVAVICFSS RGKLYEFGSA 60 GISKTLERYQ RCCFTPHDQN SIERETQSWY HEVTKLKSKY ESLQRTQRNL LGEDLGPLDV 120 KELQNLEKQL EGALAQARQR KMQIMTEQVE DLRKKERQLG DLNTQLKLKL EAEGQNLKAI 180 QNLWSSNMTS GSSSFALHTS SQSNITMDCQ QPTEPVLQIG YHQYVPAEGT SNSIPKSMAG 240 TEANFMHGWV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-109 | MIKC_MADS family protein |