PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON40632.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 745aa    MW: 81514 Da    PI: 6.5998
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON40632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS323.34.9e-993857442374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++L+++Ae v +g+++ aq +Larl+++ sp g+p++R+a+yf+eAL+  l++   + + ++pp+  ++ +++ ++ a+k+fsevsP+++f ++t Nq
  PON40632.1 385 LDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLHRAAFYFKEALNLLLLN---NSFTSVPPRCPTPFDVIFKMGAYKVFSEVSPLIQFVNFTSNQ 480
                 679**************************************************9...777789999999999*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp. 198
                 a+lea+++++r+Hi+Dfdi+ G+QW++++q+L  R++gpps++iT+++sp++++  el  ++++La+fA+e+gvpfe +v+  + le+ ++++  ++  
  PON40632.1 481 ALLEALDNADRIHIVDFDIGFGAQWASFMQELPVRNRGPPSFKITAFASPSTHHPVELTLMRDNLAQFANEIGVPFELEVVNFDFLEQTSYSMPIFRAe 579
                 ********************************************************************************9888888887777555545 PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                  E++ Vn+ +   +  +++++l++    +L++vk+lsPk+vv  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++ +k+E++ll+++i++ 
  PON40632.1 580 SEVVGVNFPI--WSSSNQPAALPN----LLRFVKQLSPKIVVSLDRGCDRSDLPFPQHILQALHSYINLLESLDAA-NVASDAVNKIEKFLLQPKIEST 671
                 7888888877..666678999999....*********************************************665.46899***************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v  +  +      ++  W+  + +aG++p ++s+++++qa++++++++++g+++e++++slvl+W++r+L+svSaWr
  PON40632.1 672 VLGRLGA----PDKMPLWKTIFASAGLTPETFSNFTETQAECVVKRTPVRGFHIEKRQASLVLCWQRRELISVSAWR 744
                 *988777....899**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    
MKRSPSPPTS AASTLSSSFG GXCGSTDNTG GVATLPPEPP AAAPTTEPTG TARKDEWASE  60
LQPIPAGILE AVTTGSGGER CGLVGLEDWE NMLSETAAAS SPGQDHSLLR WIAGDMEDPS  120
FGLKQLLQSG NTLLEFDGNA GLGMVDQGPG FDLIGGVNVS GTGSLMAGIN PSLAFSGAGF  180
TNNNNNDGNN GGWKIGSIAP TSSSGALNYK ITNCHMQNLI LSNSASSLPL PVSLPPGVIY  240
QPPPQQQHFE SPDEKPQILN PQALMNQQQA TKLSQNPNFF LPLEQHLLQP QSKRHNSGIV  300
DPNSQIPKAV PFCDPGHEFL LRKQQHHQQQ QQQQHLGFPQ QKPLMVPKQM QKVLVGPAEE  360
MTHHHHNQNH HHQQQQLQQH QHALLDQLYK AAELVGTGNF SHAQGILARL NHQLSPVGKP  420
LHRAAFYFKE ALNLLLLNNS FTSVPPRCPT PFDVIFKMGA YKVFSEVSPL IQFVNFTSNQ  480
ALLEALDNAD RIHIVDFDIG FGAQWASFMQ ELPVRNRGPP SFKITAFASP STHHPVELTL  540
MRDNLAQFAN EIGVPFELEV VNFDFLEQTS YSMPIFRAES EVVGVNFPIW SSSNQPAALP  600
NLLRFVKQLS PKIVVSLDRG CDRSDLPFPQ HILQALHSYI NLLESLDAAN VASDAVNKIE  660
KFLLQPKIES TVLGRLGAPD KMPLWKTIFA SAGLTPETFS NFTETQAECV VKRTPVRGFH  720
IEKRQASLVL CWQRRELISV SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-119GRAS family protein