PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON40344.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 662aa MW: 73842.4 Da PI: 6.8427

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON40344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.1	1.7e-11	323	379	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+ ++ a++k++g PON40344.1 323 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEEKAARSYDLAALKYWG 379 78*****************87776664446655.77****************98 PP
2	AP2	46	1.3e-14	424	473	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON40344.1 424 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 473 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MKSNTNDENN NNSSNNNWLG FSLSPNMKME VPSSDPLNHH HYHHHHQNQT QQPSSSSAQT 60 SFFHSSPQLN YGLYYGVEVE NGGLYSPLSV MPLKSDGSLC IMEALTRSQP QAMVTTSTPK 120 LEDFFGSGTM GSHHYESNDR EVMALSLDNS MFFDQNPEHE EPDHHQNLLN QLQQQSSRHQ 180 DQPQHIQAQQ QYTYYSGLRN HDIADCNLQL PTMADNGIPE IKNWVPRNYS GNHGLEHKMI 240 GCMAENGGES GSIGGMAYGD LQSLSLSMSP GSQSSCVTGS QQQVSPTVTD CVATDTKKRG 300 PEKVDQKQIV HRKSLDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQGGY 360 DMEEKAARSY DLAALKYWGP STHINFPLEN YQKELEEMKN MTRQEYVAHL RRKSSGFSRG 420 ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF 480 DITRYDVDRI MASNTLLAGE LAKRTKEAAV SAIEAANQNS ASSSFNGETL IPKKSNEGES 540 DWKMALYHSS TQQFDQKPLS MDTYKAESFS VAAENLIQQE VEDSAKMGTH LSNASSLVTS 600 LSSSREGSPD KSSLPSLYGV PSSASKFFTN PTNAVNSWIP SAQQRPALSM PHMPIFAAWT 660 DT

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MKSNTNDENN NNSSNNNWLG FSLSPNMKME VPSSDPLNHH HYHHHHQNQT QQPSSSSAQT  60
SFFHSSPQLN YGLYYGVEVE NGGLYSPLSV MPLKSDGSLC IMEALTRSQP QAMVTTSTPK  120
LEDFFGSGTM GSHHYESNDR EVMALSLDNS MFFDQNPEHE EPDHHQNLLN QLQQQSSRHQ  180
DQPQHIQAQQ QYTYYSGLRN HDIADCNLQL PTMADNGIPE IKNWVPRNYS GNHGLEHKMI  240
GCMAENGGES GSIGGMAYGD LQSLSLSMSP GSQSSCVTGS QQQVSPTVTD CVATDTKKRG  300
PEKVDQKQIV HRKSLDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQGGY  360
DMEEKAARSY DLAALKYWGP STHINFPLEN YQKELEEMKN MTRQEYVAHL RRKSSGFSRG  420
ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF  480
DITRYDVDRI MASNTLLAGE LAKRTKEAAV SAIEAANQNS ASSSFNGETL IPKKSNEGES  540
DWKMALYHSS TQQFDQKPLS MDTYKAESFS VAAENLIQQE VEDSAKMGTH LSNASSLVTS  600
LSSSREGSPD KSSLPSLYGV PSSASKFFTN PTNAVNSWIP SAQQRPALSM PHMPIFAAWT  660
DT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-128	AP2 family protein