PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON40083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | SBP | ||||||||
Protein Properties | Length: 203aa MW: 22460.6 Da PI: 9.3262 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 5.9e-42 | 87 | 163 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C adlseak+yhrrhkvCe+hska++v+v+gl+qrfCqqCsrfhe+sefDe+krsCrrrLa+hnerrrk++a PON40083.1 87 CQAERCGADLSEAKRYHRRHKVCEFHSKASAVVVAGLRQRFCQQCSRFHEVSEFDEAKRSCRRRLAGHNERRRKSSA 163 **************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MEANKMNYDQ LRHSWKEKGN IGDQDQLVMD NNIDTDEEEG GGGGGGDSSS LDKERRNKKA 60 VVAPPGRLRG SGSGSGGGGG AVSPPSCQAE RCGADLSEAK RYHRRHKVCE FHSKASAVVV 120 AGLRQRFCQQ CSRFHEVSEF DEAKRSCRRR LAGHNERRRK SSAESYADGK TSKESHQYNR 180 PESDDQRGKF LGNSTCKQFH VRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 4e-42 | SBP family protein |