PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 187aa MW: 21667.7 Da PI: 6.5195 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 8.9e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+k rqvtfskRr g++KKA+ELSvLCd+e+ +++fs +++lye+s+ PON39106.1 9 KRIEDKHSRQVTFSKRRSGLMKKAHELSVLCDVEIGLMVFSAHDRLYEFST 59 79***********************************************96 PP | |||||||
2 | K-box | 48 | 5.5e-17 | 72 | 164 | 3 | 99 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++++ ++ k +++++e++ L ++ ++L+ +l ++e+L+ keL +Le+qL++ lk iR +K+el++e + +l +kek+l+een+ L++k+ PON39106.1 72 AHDNEGESSDKLKTYDTEYDGLWANDDMLKVM-SNL---KIEELTTKELAHLERQLDSILKPIRLRKTELMMETMTTLSEKEKQLREENQFLENKVT 164 55566678888999999999999988888865.566...589999************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MGRRKVDMKR IEDKHSRQVT FSKRRSGLMK KAHELSVLCD VEIGLMVFSA HDRLYEFSTG 60 DGLGKILQHY EAHDNEGESS DKLKTYDTEY DGLWANDDML KVMSNLKIEE LTTKELAHLE 120 RQLDSILKPI RLRKTELMME TMTTLSEKEK QLREENQFLE NKVTAIVGDR GKQVQLSEVN 180 DHAAHSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65070.1 | 9e-35 | MIKC_MADS family protein |