PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 183aa MW: 21072.7 Da PI: 6.7979 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53 | 5.8e-17 | 22 | 75 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++++q++ Le+ F ++++ e++ +LA+ lg++ rqV vW+qN+Ra+++ PON39010.1 22 KKKRLNEDQVRLLERSFTFDKKLEPERKLQLADLLGIPPRQVAVWYQNKRARWR 75 566799***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 105.6 | 3.7e-34 | 21 | 112 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+++qv+lLE+sF+ ++kLeperK +la Lg+ prqvavW+qn+RAR++++ lE d++aL+ ++++ +e+++Le + e Lr el+ PON39010.1 21 NKKKRLNEDQVRLLERSFTFDKKLEPERKLQLADLLGIPPRQVAVWYQNKRARWRAQTLELDCSALQLKLETALAEKRQLEGDIEMLRGELE 112 59**************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MDLFQTQTQS HKNSYYNSKH NKKKRLNEDQ VRLLERSFTF DKKLEPERKL QLADLLGIPP 60 RQVAVWYQNK RARWRAQTLE LDCSALQLKL ETALAEKRQL EGDIEMLRGE LEMARQSLFA 120 VGVSVVDHQK AHPPPTTVCS VSEGGSSSGS FGYQYVIDHD HGHGHEDQVL QMDHELFASL 180 IDW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 3e-30 | HD-ZIP family protein |