PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38917.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ERF

Protein Properties

Length: 605aa MW: 66134.8 Da PI: 6.4784

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.4	1e-14	373	422	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON38917.1 373 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 422 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MSNWLGFSLT PHLRIHEGFQ SGREEDQDVH GGGGFPHPHP HHHHPMSVMP LRSDGSLCVP 60 AEDWRYENPN EKEGPKLEDF LGCCYSSSHH QAPDETKVYF HNQDHEQNPE TISEINVNLA 120 PSFNPNSSNG VELEIESSSA RENHDPTNPS SLIQSYGHYN NDSSGMYKSW TLGQMLPYND 180 VSDKSSSSEA NGAGCGLQTL SLTMSPSSQN GVGAISSLQV AAADGGRKRS GGKSLVKEPV 240 PRKSLDTFGQ RTSQYRGVTR EESLGIDGLG DMRPICGIIV AEKKGKQGKE GKKYLYLIRD 300 ASNGVQGGYD KEEKAARAYD LAALKYWGPT THINFPLSTY EKELEEMKDM TRQEFVANLR 360 RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF 420 RGTSAVTNFD ISRYDVKRIC SSSTLIAGDL AKRSSPKDHS PAVASLEVDF NTCPSSPSPQ 480 PLLAITSGEP SNELVDMVWS TTSANADEHH PPQEIDSETK NNMMFVGSNG RNSLNPQSPK 540 CSYGSSIEFG GGSGGGEYAH AYFMHGSSVS GKYDQHGNNG GNEHSRVGNL GLVQPHVPMF 600 ALWNE

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MSNWLGFSLT PHLRIHEGFQ SGREEDQDVH GGGGFPHPHP HHHHPMSVMP LRSDGSLCVP  60
AEDWRYENPN EKEGPKLEDF LGCCYSSSHH QAPDETKVYF HNQDHEQNPE TISEINVNLA  120
PSFNPNSSNG VELEIESSSA RENHDPTNPS SLIQSYGHYN NDSSGMYKSW TLGQMLPYND  180
VSDKSSSSEA NGAGCGLQTL SLTMSPSSQN GVGAISSLQV AAADGGRKRS GGKSLVKEPV  240
PRKSLDTFGQ RTSQYRGVTR EESLGIDGLG DMRPICGIIV AEKKGKQGKE GKKYLYLIRD  300
ASNGVQGGYD KEEKAARAYD LAALKYWGPT THINFPLSTY EKELEEMKDM TRQEFVANLR  360
RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF  420
RGTSAVTNFD ISRYDVKRIC SSSTLIAGDL AKRSSPKDHS PAVASLEVDF NTCPSSPSPQ  480
PLLAITSGEP SNELVDMVWS TTSANADEHH PPQEIDSETK NNMMFVGSNG RNSLNPQSPK  540
CSYGSSIEFG GGSGGGEYAH AYFMHGSSVS GKYDQHGNNG GNEHSRVGNL GLVQPHVPMF  600
ALWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-101	AP2 family protein