PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON38915.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GRF | ||||||||
Protein Properties | Length: 355aa MW: 39593.7 Da PI: 8.4575 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79 | 4.4e-25 | 80 | 124 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e PON38915.1 80 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 124 79****************************************985 PP | |||||||
2 | QLQ | 59.9 | 7.3e-21 | 14 | 49 | 1 | 36 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FTa+Q+q+L++Q+l++Ky+++++P+Pp+L+ ++ PON38915.1 14 SPFTATQWQELEHQALIFKYMVSGVPIPPDLIYSVK 49 89*****************************87665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MISANSSAAR GNRSPFTATQ WQELEHQALI FKYMVSGVPI PPDLIYSVKR SLDSSFSSRL 60 FSQHPPGWGC FEMGFGRKVD PEPGRCRRTD GKKWRCSKEA YPDSKYCERH MHRGRNRSRK 120 PVEVSSSTTT ILTTTTAMTS PAPAISSVNR NLSGTGPTIS SYSQLSSSSI VSEPLSGHNH 180 PHQYPFVYSP HSSSSSSRPP DYGLSTQNSN TSSPYFCVKS ESYITQPDKD YRYFQGTKES 240 MDELAFFPES SGNARSFPES CHSLMSSYRG YSQPQFHGLT DESKEAIKQS AEQDQQHCFI 300 LGTDFKSERG NKSGKESEIT QKPLHHFFGE WPPKNTASAD SWLDLASNSR VPNDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 3e-53 | GRF family protein |