PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON38369.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 308aa MW: 34932.5 Da PI: 7.1278 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.1 | 1e-18 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++++G g+W++ a++ g++Rt+k+c++rw++yl PON38369.1 23 RGPWTVEEDTLLIHYITRHGEGRWNLLAKRSGLRRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5.3e-17 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE+ l++d++ ++G++ W++Ia++++ gRt++++k++w++ PON38369.1 76 RGNLTPEEQILILDLHSKWGNR-WSKIAQYLP-GRTDNEIKNYWRT 119 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MSTNSKSSTN TSSSEDDTNE LRRGPWTVEE DTLLIHYITR HGEGRWNLLA KRSGLRRTGK 60 SCRLRWLNYL KPDVKRGNLT PEEQILILDL HSKWGNRWSK IAQYLPGRTD NEIKNYWRTR 120 VQKQAKHLKI DTESAAFQDI IRRLWMPRLL QKIENASTAA NMSIIQNSSP APLPVDNASQ 180 QYYSSTQVVS GHENVNNMPG WTVNERSSDS ESMNISQISQ FQEYPSSTFQ PNLVNNVNGY 240 NNTFLGGYSC GTGENNAYDS MDVSNQSTIS EGGFVNSVGG CHGAGNNWAD NDFFAGVWNM 300 DELWQYRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 4e-79 | MYB family protein |