PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38112.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 556aa MW: 62823.2 Da PI: 6.9349

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.7	9.8e-12	107	148	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W ++++ ll+++++++G g+W Ia+++g +++ +qc++++ + PON38112.1 107 WNADDEILLLEGIEMYGLGNWLDIAEHVG-TKSKEQCINHYTN 148 ***************************.*********88 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MGRSRGKFHS PDEDPTQRSR RKKNASSGEN LESATAGQGT SEGKALYHCN YCNKDITGKI 60 RIKCCTCADF DLCIECFSVG AEVTPHKSNH PYRVMDNLSF PLICPDWNAD DEILLLEGIE 120 MYGLGNWLDI AEHVGTKSKE QCINHYTNVY MNSPFFPLPD MTHVVGKNRK ELLAMAKGHS 180 EEKKGLPMIA ELNLKEDSPF SPSRIKIEDS HKGGSSSRLL SSLNADSGPR SGGINVVANA 240 PNKKPNVTQV KDCPGIVKVE DPQADRNFIG KKPISGNEGS SLVELSGYNP KRQEFDPEYD 300 NDAEQLLADM EFKEADTEEE RELKLRVLRI YSKRLDERKR RKDFILDRNL LYPNHFEKDL 360 LPVERTICRR YDVFMRFHSK EEHEELLQTV ISEHRTLKRI QELKEARGAG CRTSVEAERF 420 LEQKRKREAE ENACRTKESA HVGPSSQGGP NAYMASELTA KDTNSRPARQ VTLNPIGDMD 480 VMGFNGADLL SEAEKRLCSE TKLPPPIYLK MQEVMSVEIF SGNINKKSDA HHLFKIEPSR 540 IDMVYDMLVK KGIAQP

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MGRSRGKFHS PDEDPTQRSR RKKNASSGEN LESATAGQGT SEGKALYHCN YCNKDITGKI  60
RIKCCTCADF DLCIECFSVG AEVTPHKSNH PYRVMDNLSF PLICPDWNAD DEILLLEGIE  120
MYGLGNWLDI AEHVGTKSKE QCINHYTNVY MNSPFFPLPD MTHVVGKNRK ELLAMAKGHS  180
EEKKGLPMIA ELNLKEDSPF SPSRIKIEDS HKGGSSSRLL SSLNADSGPR SGGINVVANA  240
PNKKPNVTQV KDCPGIVKVE DPQADRNFIG KKPISGNEGS SLVELSGYNP KRQEFDPEYD  300
NDAEQLLADM EFKEADTEEE RELKLRVLRI YSKRLDERKR RKDFILDRNL LYPNHFEKDL  360
LPVERTICRR YDVFMRFHSK EEHEELLQTV ISEHRTLKRI QELKEARGAG CRTSVEAERF  420
LEQKRKREAE ENACRTKESA HVGPSSQGGP NAYMASELTA KDTNSRPARQ VTLNPIGDMD  480
VMGFNGADLL SEAEKRLCSE TKLPPPIYLK MQEVMSVEIF SGNINKKSDA HHLFKIEPSR  540
IDMVYDMLVK KGIAQP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	343	RKRRKD