PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON38081.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 298aa    MW: 32855 Da    PI: 6.936
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON38081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025106128123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  PON38081.1 106 FSCNYCQRKFYSSQALGGHQNAH 128
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDQLPSTRTN EPSSCPNTEF DHDHDYDQKD QEDDDHQEKE KMITANESGK FSLDLNLTGT  60
TTESSNIIDD GLIDSQELSL IDSLAAEAVA SSPPSEHAAA EPGRVFSCNY CQRKFYSSQA  120
LGGHQNAHKR ERTLAKRSGQ KLVGNDHVVA APAAFGGHHH YPSFSRRHWS SMASLPLHGA  180
NVYNNRSLGI QVHSMIHKPN SQYHNSSSTM LYGNFGSWPK LLPNSFDQQP AIGKHTTTNG  240
LSSKVSASRF DVPKTTMIGA SQSGHERING ARYNWCASGA THDHRNEETK KLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.11e-34C2H2 family protein