PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON37861.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family SBP
Protein Properties Length: 185aa    MW: 20703.2 Da    PI: 6.597
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON37861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.31.6e-41101177278
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                 Cq+++C+adl+eak+yhrrhk+Ce+h+ka+ v+v+g +qrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+++
  PON37861.1 101 CQADNCNADLTEAKHYHRRHKICEFHAKASFVIVNGFQQRFCQQCSRFHGLPEFDDSKRSCRRRLAGHNERRRKSSS 177
                 **************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEPNRGQGKR SFSLKMEDHQ LEGAAEEEEE EEEEDEDDDV SGLGFGSNTT TTTTGDDDDM  60
IMRKRRPTMT GSYSSNTSSS SGTSTRRSGS GAGGSTRPSS CQADNCNADL TEAKHYHRRH  120
KICEFHAKAS FVIVNGFQQR FCQQCSRFHG LPEFDDSKRS CRRRLAGHNE RRRKSSSDHH  180
REGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.13e-29SBP family protein