PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON37515.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 24555.9 Da PI: 8.6647 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.8 | 2.5e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+ELS+LCdae a+i+fsstgkly+yss PON37515.1 9 KKINNITARQVTFSKRRRGLFKKAQELSTLCDAEMALIVFSSTGKLYDYSS 59 689**********************************************96 PP | |||||||
2 | K-box | 51 | 6.3e-18 | 87 | 167 | 18 | 98 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +a L ke+ + +e+R+++Ge+Le+L l eL++Le+ +e +l ++ ++K++ +l++i++l++k +l e+n+ L++++ PON37515.1 87 LERYASLSKELAEKTTEIRQMKGEKLEDLGLDELKRLEKLVEAGLGRVIETKDDRILKEINTLKRKGVQLLEDNHHLKQQM 167 4567888888888889**************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MTRQKIEIKK INNITARQVT FSKRRRGLFK KAQELSTLCD AEMALIVFSS TGKLYDYSSS 60 SMQKVIERRY FQSEHPAKSS QPSVDELERY ASLSKELAEK TTEIRQMKGE KLEDLGLDEL 120 KRLEKLVEAG LGRVIETKDD RILKEINTLK RKGVQLLEDN HHLKQQMAGT RRVQTDIIDQ 180 GQSSDSITGI CSSADLPEDF DSSDTTLKLG LPFPGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-66 | MIKC_MADS family protein |