PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON37514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 25225.9 Da PI: 8.0085 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.4 | 1.6e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA ELS+LCda++a+i+fs tgklyey+s PON37514.1 9 KKIDNITARQVTFSKRRRGLFKKALELSTLCDAQIALIVFSATGKLYEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 42.3 | 3.3e-15 | 91 | 171 | 18 | 98 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + a L+ e+e+ e+Rh++Ge+L++Lsl+e+++Le+ +e++l+++ + K++ l++i l++k el e+n++L++k PON37514.1 91 RSRCASLRTELEEKTMELRHMKGEELQELSLEEIKKLENLVETGLSRVAELKDQRSLKEITFLKRKGIELLEDNHRLKQKT 171 5567789999999999**************************************************************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 219 aa Download sequence |
MTRQKIEIKK IDNITARQVT FSKRRRGLFK KALELSTLCD AQIALIVFSA TGKLYEYASS 60 SMQQVIQRHN CQSENHHKLS QPSVDVLECE RSRCASLRTE LEEKTMELRH MKGEELQELS 120 LEEIKKLENL VETGLSRVAE LKDQRSLKEI TFLKRKGIEL LEDNHRLKQK TNVVQVQADL 180 LEKHLIDSIT DIYNTTNSLP HQDHYGSDTT LKLGLPSPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-67 | MIKC_MADS family protein |