PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37309.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 427aa MW: 46568 Da PI: 6.8986

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl PON37309.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.9e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l PON37309.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPVTHKSKN DLLSNDSQSK NAANLSHMAQ WESARLEAEA RLVRESKHRC CSFTASNNPP 180 LNGSASTPPA QHQLRNNHHY NNSNVFKAAT WSITTGSSGI WSKSHASGFH SVDLESPTST 240 LTFSENAPPV MAAGTTTTTT TTTTTTTSKH LTNNGNNNNN MIEFVGSSSA SSESGIVKEG 300 GEQEWKGFGG SGNNNSVCRL SENYEEGLDN SLSFNINGGG TSWTHAHSLK TTTTNNDDDA 360 IVEEGFTSLL LNNISKDPSF SDGGGGGDDD ESGGSGSGIS EHYQDNENYW HIILNLVNSS 420 PSDSPMF

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPVTHKSKN DLLSNDSQSK NAANLSHMAQ WESARLEAEA RLVRESKHRC CSFTASNNPP  180
LNGSASTPPA QHQLRNNHHY NNSNVFKAAT WSITTGSSGI WSKSHASGFH SVDLESPTST  240
LTFSENAPPV MAAGTTTTTT TTTTTTTSKH LTNNGNNNNN MIEFVGSSSA SSESGIVKEG  300
GEQEWKGFGG SGNNNSVCRL SENYEEGLDN SLSFNINGGG TSWTHAHSLK TTTTNNDDDA  360
IVEEGFTSLL LNNISKDPSF SDGGGGGDDD ESGGSGSGIS EHYQDNENYW HIILNLVNSS  420
PSDSPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-113	MYB family protein