PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37259.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

CPP

Protein Properties

Length: 538aa MW: 58811.1 Da PI: 8.3612

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.1	8.6e-14	132	170	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+C++s+Clk+YCeCf ag +C+ C+C +C+N+ + PON37259.1 132 KQKQCKCRNSRCLKLYCECFTAGIYCDG-CNCLNCHNNVD 170 79************************.******986 PP
2	TCR	50.8	3.2e-16	216	254	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgCnC+ks ClkkYCeCf+a+ Cse+CkC+dCkN PON37259.1 216 KHNKGCNCRKSGCLKKYCECFQANILCSENCKCSDCKNF 254 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MEQTETISDF PAKKLARQLD FTAACRVSSA NAVVQEKLEP ESHPFSVAPP IAQLQLQLKS 60 QEQTITSPPQ AQAQRQLTQS PLQARPNQVP VSHPRIPHPV HKLPTQTMSL SVKQESPKSR 120 PWTDAKDGTP NKQKQCKCRN SRCLKLYCEC FTAGIYCDGC NCLNCHNNVD NDAARKEVIA 180 TILERNPNAF RPKIDSSPNE SRDGREEAGD TQAAGKHNKG CNCRKSGCLK KYCECFQANI 240 LCSENCKCSD CKNFDGSDER RALFHEDYTA VYRQQAANAA INGAVGSSGY GIPLTSRKRK 300 SHELFFGHLT RDQSISMTGR GQQVNHPIAS VSSPVVPVPV RHNAAALGSS KFTYRSPLAD 360 VLQPRDVKNF CTFLVAVSGE AARAFAESRQ TKNGNKTPIA SATQRSEDSR EENDVQNAGD 420 NHLLEGKKAD RDGTSDSRSD ACDVQIDEPR SPGTLALMCD EKDTMFMAAG LPNGGKTQDT 480 MFMAAGLPNG GKTRCGNMTQ KSSSENKCTE LYADQESSIL TVLCNFLKKV ITRGSIKG

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MEQTETISDF PAKKLARQLD FTAACRVSSA NAVVQEKLEP ESHPFSVAPP IAQLQLQLKS  60
QEQTITSPPQ AQAQRQLTQS PLQARPNQVP VSHPRIPHPV HKLPTQTMSL SVKQESPKSR  120
PWTDAKDGTP NKQKQCKCRN SRCLKLYCEC FTAGIYCDGC NCLNCHNNVD NDAARKEVIA  180
TILERNPNAF RPKIDSSPNE SRDGREEAGD TQAAGKHNKG CNCRKSGCLK KYCECFQANI  240
LCSENCKCSD CKNFDGSDER RALFHEDYTA VYRQQAANAA INGAVGSSGY GIPLTSRKRK  300
SHELFFGHLT RDQSISMTGR GQQVNHPIAS VSSPVVPVPV RHNAAALGSS KFTYRSPLAD  360
VLQPRDVKNF CTFLVAVSGE AARAFAESRQ TKNGNKTPIA SATQRSEDSR EENDVQNAGD  420
NHLLEGKKAD RDGTSDSRSD ACDVQIDEPR SPGTLALMCD EKDTMFMAAG LPNGGKTQDT  480
MFMAAGLPNG GKTRCGNMTQ KSSSENKCTE LYADQESSIL TVLCNFLKKV ITRGSIKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	SRKRKS
2	298	302	KRKSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-128	CPP family protein