PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36586.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 1184aa MW: 131478 Da PI: 9.6371

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.1	1.8e-07	65	98	3	38
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 W++ E e++++a +++G++ W+++a+ + +R+ PON36586.1 65 QWSKGELERFYEAYRKYGKD-WRKVAAAVR-NRSVD 98 6***************99.*******.99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 1184 aa Download sequence
MAPNKKSRVN KRYGGSVPYS PDKDVGHSAK NKQRGSISIS PDKEGGNSSK NIQRKKKLSD 60 KLGSQWSKGE LERFYEAYRK YGKDWRKVAA AVRNRSVDMV EALYSMNRAY LSLPEGTASV 120 VGLIAMMTDH YNVLEGSDSE QESNDGSGVS RKPQKRKRGR DPPSTSKDIF QSYSIASTDG 180 CLSLLKRKRS DGSQPRVVGK RTPRIPVSYS HKREYNENYI SPIKKGRKSE NDNDDEVAHV 240 AALALTEASQ RVGSPQVSTP YKHINSSPAQ SWERFAARPQ NEAAHARLRD TSVDEDLFEG 300 SVGSRGAENG DYGKDNSSLM DMEGVGTVKV HRKKKKFYGK KEKVEDDDGG EACSGTEEGL 360 NVSSLKGKVD VEVSNAKAER VSPQGQRKRS KKLFFGDESS VFDALQTLAD LSLMMPPCTM 420 ESESSVQLKE ERTTLGTEDK ISVPEATSQV RNRNKFLGAK QKVPHSVSRV EGISKKSKLG 480 RDSTVDVSND STMEQPYSAT KTWKRKRKSL VSKVSSAEAH LDSHASEAVK TEVICEEENK 540 PVIKGKRSSQ TSTPSKRWKS VRSSEGSLSS DYKRTGSGTD LIVSTAQVAA ASQVNLPTKQ 600 RSKRKMYLHR ALPPKEVKSS QNIVKRQANR YSTSAKEKLS CCLSSYMVRR WCTFEWFYSA 660 IDYPWFAKRE FEEYLNHVGL GHIPRLTRVE WGVIRSSLGK PRRFSEHFLH EEREKLKQYR 720 ESVREHYTEL RTGVREGLPT DLAKPLTVGQ QVIAIHPRTR EVHDGSVLTV DHDKCRVQFD 780 RPEIGVEFVM DVDCMPLNLM ENMPEALRRQ NITIDKFSLT SKETQLNGNL NFGGPIMFAS 840 TGHLEKAPTS MNTLGKHGKG DSTHAISQLK AAAIDIVSAQ PISYGQSFMV ANNQAREADV 900 RALSELTRAL DKKEALLMEL RKTNNEIVEN QNNGDYSLKD CELFKKHYAT VLVQLQEASG 960 QVSSALLDLR QRNTYPGNAL FPGLKTPVNS TTHGGLPGSF DNFSISQDSG SSVVEIVKGS 1020 TIKAQTMVDA AIQAFSSIKE GEDAYAKIKE ALDSMDYKSL TSESRVSVNR SQEQVNGNVA 1080 LRNQLVSCTS EPAITGDSSA SNLRMDSDKN EAQVPSDIIT SCVATLLMIQ TCTERQYPPA 1140 EVAQILDSAV SSLHPCCPQN LQIYREIQNY MGRIKTQILA LVPT

Sequence ? help Back to Top

Protein Sequence Length: 1184 aa Download sequence

MAPNKKSRVN KRYGGSVPYS PDKDVGHSAK NKQRGSISIS PDKEGGNSSK NIQRKKKLSD  60
KLGSQWSKGE LERFYEAYRK YGKDWRKVAA AVRNRSVDMV EALYSMNRAY LSLPEGTASV  120
VGLIAMMTDH YNVLEGSDSE QESNDGSGVS RKPQKRKRGR DPPSTSKDIF QSYSIASTDG  180
CLSLLKRKRS DGSQPRVVGK RTPRIPVSYS HKREYNENYI SPIKKGRKSE NDNDDEVAHV  240
AALALTEASQ RVGSPQVSTP YKHINSSPAQ SWERFAARPQ NEAAHARLRD TSVDEDLFEG  300
SVGSRGAENG DYGKDNSSLM DMEGVGTVKV HRKKKKFYGK KEKVEDDDGG EACSGTEEGL  360
NVSSLKGKVD VEVSNAKAER VSPQGQRKRS KKLFFGDESS VFDALQTLAD LSLMMPPCTM  420
ESESSVQLKE ERTTLGTEDK ISVPEATSQV RNRNKFLGAK QKVPHSVSRV EGISKKSKLG  480
RDSTVDVSND STMEQPYSAT KTWKRKRKSL VSKVSSAEAH LDSHASEAVK TEVICEEENK  540
PVIKGKRSSQ TSTPSKRWKS VRSSEGSLSS DYKRTGSGTD LIVSTAQVAA ASQVNLPTKQ  600
RSKRKMYLHR ALPPKEVKSS QNIVKRQANR YSTSAKEKLS CCLSSYMVRR WCTFEWFYSA  660
IDYPWFAKRE FEEYLNHVGL GHIPRLTRVE WGVIRSSLGK PRRFSEHFLH EEREKLKQYR  720
ESVREHYTEL RTGVREGLPT DLAKPLTVGQ QVIAIHPRTR EVHDGSVLTV DHDKCRVQFD  780
RPEIGVEFVM DVDCMPLNLM ENMPEALRRQ NITIDKFSLT SKETQLNGNL NFGGPIMFAS  840
TGHLEKAPTS MNTLGKHGKG DSTHAISQLK AAAIDIVSAQ PISYGQSFMV ANNQAREADV  900
RALSELTRAL DKKEALLMEL RKTNNEIVEN QNNGDYSLKD CELFKKHYAT VLVQLQEASG  960
QVSSALLDLR QRNTYPGNAL FPGLKTPVNS TTHGGLPGSF DNFSISQDSG SSVVEIVKGS  1020
TIKAQTMVDA AIQAFSSIKE GEDAYAKIKE ALDSMDYKSL TSESRVSVNR SQEQVNGNVA  1080
LRNQLVSCTS EPAITGDSSA SNLRMDSDKN EAQVPSDIIT SCVATLLMIQ TCTERQYPPA  1140
EVAQILDSAV SSLHPCCPQN LQIYREIQNY MGRIKTQILA LVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	228	KRKRSDGSQPRVVGKRTPRIPVSYSHKREYNENYISPIKKGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein