PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36488.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 624aa MW: 69296 Da PI: 6.5988

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.2e-13	451	497	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq PON36488.1 451 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 497 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MKIEVGLGGG GVWNDEDKAM VAAVLGTRAF DYLISSSVTN ENLLMAVGSD ENLQNKLSDL 60 VDRPNASNFS WNYAIFWQIS RSKSGDWVLG WGDGSCREPR EGEESEATRM LNLRLEDETQ 120 QRMRKRVLQK LHNLFGGSDE DNYALGLDRV TDTEMFFLAS MYFSFPRGEG GPGKCYASGK 180 HLWLPDALKL SSDYCFRSFL AKSAGIQTIV LVPTEVGVVE LGSVRSVGES VELLQSIRSL 240 FSTQSSLMRV SKPVAVVPVM CEKRDENIHL ANSGIVERSE GAPKIFGQDL NAGNIVRPHY 300 REKLAIRKLE ERPWDMYSNG NGNRIAFSSP RNGIHGSSWP HSLQGVKQGG NPADIYVSQS 360 PGSNNIQELV NGVREDFRLN NYQPQKQVQM QIDFSGATSR STMINHRSIS AESEHSDVEA 420 SCKEEQPSTA DERRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNISKM 480 DKASLLGDAI AYINELQAKV KVMEAEREKV GSCSRDAASA AMEANIPDME NQIRVPDVDV 540 KVVNDEVIVR VSCALDSHPA SRIIQAFKEA QITVVESKFA TVNDTVFHTF VIKSEGSEQL 600 TKEKLVAAFS REANSLRTLS SVGS

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MKIEVGLGGG GVWNDEDKAM VAAVLGTRAF DYLISSSVTN ENLLMAVGSD ENLQNKLSDL  60
VDRPNASNFS WNYAIFWQIS RSKSGDWVLG WGDGSCREPR EGEESEATRM LNLRLEDETQ  120
QRMRKRVLQK LHNLFGGSDE DNYALGLDRV TDTEMFFLAS MYFSFPRGEG GPGKCYASGK  180
HLWLPDALKL SSDYCFRSFL AKSAGIQTIV LVPTEVGVVE LGSVRSVGES VELLQSIRSL  240
FSTQSSLMRV SKPVAVVPVM CEKRDENIHL ANSGIVERSE GAPKIFGQDL NAGNIVRPHY  300
REKLAIRKLE ERPWDMYSNG NGNRIAFSSP RNGIHGSSWP HSLQGVKQGG NPADIYVSQS  360
PGSNNIQELV NGVREDFRLN NYQPQKQVQM QIDFSGATSR STMINHRSIS AESEHSDVEA  420
SCKEEQPSTA DERRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNISKM  480
DKASLLGDAI AYINELQAKV KVMEAEREKV GSCSRDAASA AMEANIPDME NQIRVPDVDV  540
KVVNDEVIVR VSCALDSHPA SRIIQAFKEA QITVVESKFA TVNDTVFHTF VIKSEGSEQL  600
TKEKLVAAFS REANSLRTLS SVGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	433	441	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein