PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36353.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 614aa MW: 69279.7 Da PI: 6.9009

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.5	1e-29	139	224	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea PON36353.1 139 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 224 8***********************************999*************************98..55667*****85 PP
2	trihelix	64.9	1.7e-20	445	527	2	82
trihelix 2 WtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyf 82 W+++ev Li++r++m++r+++g +++ lWe++++km+ g+ers +Ck+kwe++n++ ke++kkr+ + +ss+ yf PON36353.1 445 WPESEVSRLIQLRTSMDSRFQQGGfSEEVLWEDIAAKMACLGYERSGLMCKDKWESINNYVNISKESSKKRKeNSRSSSGNYF 527 *******************9754889****************************************9525555566666 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MEMEDQYGMA DLRQLMNGTR SHFPVIPQPT ELFPGHRPGI APQQQQQQQV VQQPFEMMMM 60 GRPAGATEIM PRGPFHHHHH HQHHQFIRSE SSAGTTSGAA SITTVTATSA PSLSGGGGGG 120 FELGESGGCL GMMDGGTGRW PRQETLTLLE IRSRLDSKFK EANQKGPLWD EVSRIMSEEH 180 GYQRSGKKCR EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGETS NQVSVPEAHF 240 VGNNLRFQTL NNTTTSQANN QLEGPYQSQT NKHNCDSLSL SNSSDFDSSS SDDNDFTNAG 300 LMMDNDSSEK MMMRRKRRSG RSWKVKIKEF IDSQMRKLME KQEVWLEKLM KTLEQKEKER 360 TLREEEWRKQ ESVRIDREHK FWAKERAWIE ARDAALMEAL HKLTGKEVNY KASSPECLML 420 AAGENNVQDE DGSETQNNVA KGDTWPESEV SRLIQLRTSM DSRFQQGGFS EEVLWEDIAA 480 KMACLGYERS GLMCKDKWES INNYVNISKE SSKKRKENSR SSSGNYFQNN NNENSATTAN 540 NNSLYNHGGG GGGAYSCDQT SDQGGQTTAR LQVNDGSSPS NANVHDSCFP FLMGEGDNLW 600 ENYGLKLSKG GQSQ

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MEMEDQYGMA DLRQLMNGTR SHFPVIPQPT ELFPGHRPGI APQQQQQQQV VQQPFEMMMM  60
GRPAGATEIM PRGPFHHHHH HQHHQFIRSE SSAGTTSGAA SITTVTATSA PSLSGGGGGG  120
FELGESGGCL GMMDGGTGRW PRQETLTLLE IRSRLDSKFK EANQKGPLWD EVSRIMSEEH  180
GYQRSGKKCR EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGETS NQVSVPEAHF  240
VGNNLRFQTL NNTTTSQANN QLEGPYQSQT NKHNCDSLSL SNSSDFDSSS SDDNDFTNAG  300
LMMDNDSSEK MMMRRKRRSG RSWKVKIKEF IDSQMRKLME KQEVWLEKLM KTLEQKEKER  360
TLREEEWRKQ ESVRIDREHK FWAKERAWIE ARDAALMEAL HKLTGKEVNY KASSPECLML  420
AAGENNVQDE DGSETQNNVA KGDTWPESEV SRLIQLRTSM DSRFQQGGFS EEVLWEDIAA  480
KMACLGYERS GLMCKDKWES INNYVNISKE SSKKRKENSR SSSGNYFQNN NNENSATTAN  540
NNSLYNHGGG GGGAYSCDQT SDQGGQTTAR LQVNDGSSPS NANVHDSCFP FLMGEGDNLW  600
ENYGLKLSKG GQSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-127	Trihelix family protein