PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON36265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 392aa MW: 44281.1 Da PI: 7.666 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 219 | 238 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + Cp C k F+r nL+ H+ PON36265.1 219 FHCPLCFKFFNRYNNLQMHM 238 78*****************9 PP | |||||||
2 | zf-C2H2 | 15.2 | 6.2e-05 | 303 | 325 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k+F k + ++H +++ PON36265.1 303 FRCRKCDKPFAVKGDWRTHEKNC 325 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 392 aa Download sequence |
MTNPHSNLFN GWINFISLHP HCYSPTPNYN SSNTTTTTTT NNNNIHCFNN SNLLPCCANY 60 SNNQQLISRK YQLPYYGFSS DNNNINVLSS SLPSKEALPL IDKLKPLGNT QDHHQQQQLL 120 SSNTKTGDQA GSDHHNKNDD DDDDCDEKTR VTVALHIGLP SPNSDEAGVG SGVMADIKEL 180 RGVTSSDHAV CSWDRQGGGT SHPYWIPTPS QILVGSTQFH CPLCFKFFNR YNNLQMHMWG 240 HGSQYRKGPE SLKGSQPTAM MRVPCYCCWP GCKHNISHPR AKPLKDFRTL QTHYKRKHGS 300 KPFRCRKCDK PFAVKGDWRT HEKNCGKIWY CICGSDFKHK RSLKDHVKAF GRGHAAFDDH 360 LQCLDDDDDN DDDELASQIE QDASYSPPSY DK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20880.1 | 1e-103 | C2H2 family protein |