PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36010.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 402aa MW: 45707.5 Da PI: 4.3388

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46	1.4e-14	169	251	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a e+ + ++++l+ W+ev++k++e ++ r+ +qC+++++ l+k+ykk+k ++ ++ +s+++yf++++ PON36010.1 169 WTERETFVLLDAWGERFLQRGKKSLRSEEWQEVAEKVSEvSKIDRTDTQCRNRLDTLKKKYKKEKLNSTGG---GTSKWVYFKKID 251 ***********************************762678******************999986...6679***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MDDTEDDARY PPNAYGGNHH QGYGSSHRQK LPGQDGPYTR PVGGSYVDED DEEEDEDEDE 60 ELGEEEDDNN NNGQNNGYPP VRKHGNGDDD DDDEDDDVDE VAEDEDLDKR KDYGRKSDDV 120 DLERHPKKRK LKSLVSSYEF AARVPPAPSA ATPSAPRLSF GGRNSLTDWT ERETFVLLDA 180 WGERFLQRGK KSLRSEEWQE VAEKVSEVSK IDRTDTQCRN RLDTLKKKYK KEKLNSTGGG 240 TSKWVYFKKI DLLLSSPNQQ SGLSCGMDSG EYVFMNPRLY LNCANGLDEM RDSPVNSLSE 300 EGEDSDGLPP KKRKSGRDKD DDEGSSSFRL LADTIQKFGE IYEKIEDSKR QQMVELEKMR 360 MDFQRDLELQ RRQIMERAQA EIAKIRQGDD DEIDVSAENG SG

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MDDTEDDARY PPNAYGGNHH QGYGSSHRQK LPGQDGPYTR PVGGSYVDED DEEEDEDEDE  60
ELGEEEDDNN NNGQNNGYPP VRKHGNGDDD DDDEDDDVDE VAEDEDLDKR KDYGRKSDDV  120
DLERHPKKRK LKSLVSSYEF AARVPPAPSA ATPSAPRLSF GGRNSLTDWT ERETFVLLDA  180
WGERFLQRGK KSLRSEEWQE VAEKVSEVSK IDRTDTQCRN RLDTLKKKYK KEKLNSTGGG  240
TSKWVYFKKI DLLLSSPNQQ SGLSCGMDSG EYVFMNPRLY LNCANGLDEM RDSPVNSLSE  300
EGEDSDGLPP KKRKSGRDKD DDEGSSSFRL LADTIQKFGE IYEKIEDSKR QQMVELEKMR  360
MDFQRDLELQ RRQIMERAQA EIAKIRQGDD DEIDVSAENG SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	130	KRKDYGRKSDDVDLERHPKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	7e-68	Trihelix family protein