PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON35648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 418aa MW: 45496.5 Da PI: 7.5008 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.001 | 164 | 186 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PON35648.1 164 YECKTCNRTFPSFQALGGHRASH 186 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.8 | 0.00037 | 265 | 287 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H PON35648.1 265 HECSICGAEFTSGQALGGHMRRH 287 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MEATAQEDVI TVSKEQTGLV VNKGKRTKRQ RPQSPLPFAA LATNSSTGNG GGSDNDDNNN 60 NNNNNRNANS PSPATSAEIQ DSTEEEDQDM ATCLILLAQG HSRQSPPPPK QLSPPDAAAA 120 AAAEDGGGGF GAYTKHNSRK FLEAIQAPSP PGNNIKAAAG YYVYECKTCN RTFPSFQALG 180 GHRASHKKPK AAVADQTVML ENKRNHHLFG LPSDDEDQTQ LIKTNNNNNN NISSTALSLQ 240 LSNNRSSTNL YGSSTNFINK ANKVHECSIC GAEFTSGQAL GGHMRRHRAP VGTTTTSTAL 300 SLTTTTNTTT TAATTTQLMA LDHQPNDNDH DNHNHNQRHR HHHQQQQQAN KTRNVLSLDL 360 DLNLPAPEDN QQEPKFGFVA KQQQQQQQQQ QQQQQQQQKQ QQSSTLVFSA PALVDCHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10470.1 | 2e-44 | C2H2 family protein |