PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35300.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 791aa MW: 87580.6 Da PI: 7.3378

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75	9e-24	162	263	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + + + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + +++el+ PON35300.1 162 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QRRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFL--RGENGELR 257 99**************************853.3345679*********************************************..4499999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ PON35300.1 258 LGIRRA 263 ***996 PP
2	Auxin_resp	116.8	1.9e-38	288	369	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 aa+a+stks+F+v+Y+Pra+++eFv++++k++k+++++v++G+Rfk +f++eds+err+sG+v+g+ dldp+rW nSkWr+L PON35300.1 288 AANAVSTKSMFHVFYSPRAAHAEFVIPYQKFLKSIRNPVTIGTRFKTRFDMEDSPERRCSGVVTGICDLDPYRWANSKWRCL 369 799******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MEIDLNHVVA EVEKNVYCNG DCEKCSCVCC LSSSTSSCSS NSNSAPVSSS IYLELWHACA 60 GPLTSLPKKG NVVVYFPQGH LEQVAPFSPV ELPTFDLQPQ IFCKVINVQL LANKENDEVY 120 THVTLLPQPE LIGVKQEGQD LEESGGDEGV GGLPTKSTPH MFCKTLTASD TSTHGGFSVP 180 RRAAEDCFPP LDYKQRRPSQ ELVAKDLHGV EWRFRHIYRG QPRRHLLTTG WSIFVNQKNL 240 VSGDAVLFLR GENGELRLGI RRAVRPRNGL PDSIVRNQNS YSNVLSLAAN AVSTKSMFHV 300 FYSPRAAHAE FVIPYQKFLK SIRNPVTIGT RFKTRFDMED SPERRCSGVV TGICDLDPYR 360 WANSKWRCLT VRWDENIGNN HQERVSPWEI DPSASLPPLS IQSSPRLKKM RTSLHANPPS 420 NPMTGGGGFL DFEESVRSSK VLQGQENIGF ISPVYGCDTV NRPLDFEMRS PAHQSLASNT 480 TRKATMNEFV RAQPTYTGFA ESSRFPKVLQ GQEICQLRSL AGKTNLNLGA WGKSTLGCTS 540 FNTYQAAKPS FFSLASESLQ NTYFPYGDVH RAGSNPTIHS GTTTFPIENV NMNQYSIQTG 600 IIRNEVGRPT ISNELKPQEK ISGLPTLETN LRNPKEDSFG GTVTGCKLFG FSLTGETTAP 660 NSQSASKRSC TKVHKQGSLV GRAIDLSKLN GYGDLLSELE WLFNMEGLLK DPDKGWRILY 720 TDSENDVMVV GDDPWHEFCN VVSKIHIYSR EEVEKMTFGV TSDDQSCLEQ APVSKSSSVG 780 QPDSSPTVTR V

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MEIDLNHVVA EVEKNVYCNG DCEKCSCVCC LSSSTSSCSS NSNSAPVSSS IYLELWHACA  60
GPLTSLPKKG NVVVYFPQGH LEQVAPFSPV ELPTFDLQPQ IFCKVINVQL LANKENDEVY  120
THVTLLPQPE LIGVKQEGQD LEESGGDEGV GGLPTKSTPH MFCKTLTASD TSTHGGFSVP  180
RRAAEDCFPP LDYKQRRPSQ ELVAKDLHGV EWRFRHIYRG QPRRHLLTTG WSIFVNQKNL  240
VSGDAVLFLR GENGELRLGI RRAVRPRNGL PDSIVRNQNS YSNVLSLAAN AVSTKSMFHV  300
FYSPRAAHAE FVIPYQKFLK SIRNPVTIGT RFKTRFDMED SPERRCSGVV TGICDLDPYR  360
WANSKWRCLT VRWDENIGNN HQERVSPWEI DPSASLPPLS IQSSPRLKKM RTSLHANPPS  420
NPMTGGGGFL DFEESVRSSK VLQGQENIGF ISPVYGCDTV NRPLDFEMRS PAHQSLASNT  480
TRKATMNEFV RAQPTYTGFA ESSRFPKVLQ GQEICQLRSL AGKTNLNLGA WGKSTLGCTS  540
FNTYQAAKPS FFSLASESLQ NTYFPYGDVH RAGSNPTIHS GTTTFPIENV NMNQYSIQTG  600
IIRNEVGRPT ISNELKPQEK ISGLPTLETN LRNPKEDSFG GTVTGCKLFG FSLTGETTAP  660
NSQSASKRSC TKVHKQGSLV GRAIDLSKLN GYGDLLSELE WLFNMEGLLK DPDKGWRILY  720
TDSENDVMVV GDDPWHEFCN VVSKIHIYSR EEVEKMTFGV TSDDQSCLEQ APVSKSSSVG  780
QPDSSPTVTR V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein