PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON35216.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GRF

Protein Properties

Length: 432aa MW: 46908 Da PI: 10.6319

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON35216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.4	1.4e-24	125	169	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCsr+v++ +k+CE H+hrgr+rsrk +e+ PON35216.1 125 DPEPLRCRRTDGKKWRCSRNVIPAHKYCEQHIHRGRQRSRKLVED 169 79***************************************9986 PP
2	WRC	64.7	1.3e-20	322	360	3	41
WRC 3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 epgrCrRtDGKkW Csr+v++g+k+C rH+hrg ++ k PON35216.1 322 EPGRCRRTDGKKWQCSRDVVPGQKYCARHMHRGAKKLVK 360 89*******************************887665 PP
3	QLQ	43.9	7.3e-16	57	93	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s FT aQlq+L +Q l+y++++a++PvPp L+++i+k PON35216.1 57 SGFTSAQLQELQHQNLIYRHIVARLPVPPLLVVPIWK 93 56*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MEFQTNPSHF GRGGGGGGGG GAGRVRKRYE NGWTVGMHGG KRQEMWPLIK REQNSNSGFT 60 SAQLQELQHQ NLIYRHIVAR LPVPPLLVVP IWKSVASTLG ASFYNLYPSF IGFSRQGFDR 120 RDMMDPEPLR CRRTDGKKWR CSRNVIPAHK YCEQHIHRGR QRSRKLVEDA EVSSSPSIAK 180 IHDKSKGGSL QNSNSNISVS VGLQLMTTSS SNNTGVSHGS TTPSSSFSKN QMTCVTAPYI 240 NTNTAAMSTN TSIPVTTGIK SDHSVRSDVI ERYFGNNCII RGGNNDINVG RNLSQGLGFS 300 PRSVLQGCSG LCTNYRNGIK FEPGRCRRTD GKKWQCSRDV VPGQKYCARH MHRGAKKLVK 360 GFPPAASSAA SSAAIDPSPL PLTMAVSCKI DHVSPNTNLS ISIPASPPLI NKGKSKSSSS 420 SDTTISDTDI IA

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MEFQTNPSHF GRGGGGGGGG GAGRVRKRYE NGWTVGMHGG KRQEMWPLIK REQNSNSGFT  60
SAQLQELQHQ NLIYRHIVAR LPVPPLLVVP IWKSVASTLG ASFYNLYPSF IGFSRQGFDR  120
RDMMDPEPLR CRRTDGKKWR CSRNVIPAHK YCEQHIHRGR QRSRKLVEDA EVSSSPSIAK  180
IHDKSKGGSL QNSNSNISVS VGLQLMTTSS SNNTGVSHGS TTPSSSFSKN QMTCVTAPYI  240
NTNTAAMSTN TSIPVTTGIK SDHSVRSDVI ERYFGNNCII RGGNNDINVG RNLSQGLGFS  300
PRSVLQGCSG LCTNYRNGIK FEPGRCRRTD GKKWQCSRDV VPGQKYCARH MHRGAKKLVK  360
GFPPAASSAA SSAAIDPSPL PLTMAVSCKI DHVSPNTNLS ISIPASPPLI NKGKSKSSSS  420
SDTTISDTDI IA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	3e-25	GRF family protein