PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON34843.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C3H
Protein Properties Length: 416aa    MW: 45982.7 Da    PI: 7.4637
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON34843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.45e-08141161526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C++++r G C +Gd+C FaHg
  PON34843.1 141 VCPDYRR-GGCGRGDSCEFAHG 161
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MSSSSVCSDQ QHKLHHHHHH HLLLRDLDIP PRKLLTRRIH HHHQDLTTAD MFSPGSPRFS  60
TSGADDSTLF QKFLPYNNAD GESDDDGGSD PYSSDHFRMY EFKVRRCTRS RSHDWTDCPF  120
AHPGEKARRR DPRRHHYSGT VCPDYRRGGC GRGDSCEFAH GVFECWLHPA RYRTEACKDG  180
KNCKRKVCFF AHTPRQLRIL PLHSSGSSSE MASPVSSKKK IKYPSLNSPS STNHCCVFCS  240
CHNSFTSSPT STLLGISHFS PPMSPEKFSP ICGYGKERYG GASGGPFSGP GVVSYKDALT  300
DLMSSLEAMN FSEAASPVSP ISVAGGDRNL PWVDVFPFNG GGADDQQQFI LSPSTPNYPS  360
GSENFFGGAG SSKRYNNIVN NTNNNNDDDN ENKLNDVSNS GPSSDPDLGW VNDLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.11e-82C3H family protein