PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34227.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 668aa MW: 74828.2 Da PI: 6.57

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.4	1.5e-24	130	231	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+kvlt sd++++g +++ +k+a+e+ + ++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + +++el PON34227.1 130 FCKVLTASDTSTHGGFSVLRKHATEClpqldmtQ--STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGENGEL 224 99************************999644..444569*********************************************..449999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+v+r+ PON34227.1 225 RVGVRRH 231 *****97 PP
2	Auxin_resp	105.7	5.5e-35	256	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st+++F v+Y+Pr+ s+F+++++k+++a+++k++vGmRfkm+fe+e+++err+sGt+vgv d++p +W +SkWrsLk PON34227.1 256 ASHAVSTQTMFVVYYKPRT--SQFIISLNKYLEAVNNKYAVGMRFKMRFEGEEAPERRFSGTIVGVDDISP-QWVDSKWRSLK 335 789*************6..9******************************************999.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MMANRGGSFS QPNVAAEGDD VLYPELWRAC AGPLVDVPQL RERVYYFPQG HMEQLEASTN 60 QTNQELNQRI PLFNLPSKIL CQVINVQLLV EPETDEVYAQ ITLMPESNEA EPTSPDPCLP 120 ELQRPTVHTF CKVLTASDTS THGGFSVLRK HATECLPQLD MTQSTPTQEL VAKDLHGYEW 180 RFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDSFVFLRGE NGELRVGVRR HARQPASMAS 240 SVISSRSMHL GVLATASHAV STQTMFVVYY KPRTSQFIIS LNKYLEAVNN KYAVGMRFKM 300 RFEGEEAPER RFSGTIVGVD DISPQWVDSK WRSLKVQWDE AASILRPDRV SPWEIERSAP 360 GTLAQPAVVK NKRPRPLNDN LSLDTSNSTT STVWNYGLTQ SHDTTQLTEG KRNENHVIWR 420 HRQTDAWLSS PRPTGSPHLQ DATEDSKSVS VGPVFPKQNN DQIPEQCDRG RKTETASSFR 480 LFGFEMIDHS TNSPTVEKVA PQPNSLSGTT QVSTLSVAES EQKCGISKAS KETIPEQLQA 540 SSKESQSRQG CSTSARSRTK VQMQGVAVGR AVDLSMLEGY TQLIDELEEM FDIKGQLRPR 600 NKWEIVFTDD EGDMMLLGDD LWQEFCKIVR RIFICSSQDV KKMRSGSVLP ISSLEGDGTV 660 LSSESAEN

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MMANRGGSFS QPNVAAEGDD VLYPELWRAC AGPLVDVPQL RERVYYFPQG HMEQLEASTN  60
QTNQELNQRI PLFNLPSKIL CQVINVQLLV EPETDEVYAQ ITLMPESNEA EPTSPDPCLP  120
ELQRPTVHTF CKVLTASDTS THGGFSVLRK HATECLPQLD MTQSTPTQEL VAKDLHGYEW  180
RFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDSFVFLRGE NGELRVGVRR HARQPASMAS  240
SVISSRSMHL GVLATASHAV STQTMFVVYY KPRTSQFIIS LNKYLEAVNN KYAVGMRFKM  300
RFEGEEAPER RFSGTIVGVD DISPQWVDSK WRSLKVQWDE AASILRPDRV SPWEIERSAP  360
GTLAQPAVVK NKRPRPLNDN LSLDTSNSTT STVWNYGLTQ SHDTTQLTEG KRNENHVIWR  420
HRQTDAWLSS PRPTGSPHLQ DATEDSKSVS VGPVFPKQNN DQIPEQCDRG RKTETASSFR  480
LFGFEMIDHS TNSPTVEKVA PQPNSLSGTT QVSTLSVAES EQKCGISKAS KETIPEQLQA  540
SSKESQSRQG CSTSARSRTK VQMQGVAVGR AVDLSMLEGY TQLIDELEEM FDIKGQLRPR  600
NKWEIVFTDD EGDMMLLGDD LWQEFCKIVR RIFICSSQDV KKMRSGSVLP ISSLEGDGTV  660
LSSESAEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	372	376	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein