PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON34215.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 645aa MW: 73420 Da PI: 6.7315

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON34215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.5e-29	161	246	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++r++++++k+plW+++s+ m +e+g++rs k+Ckek+enl k+ykk+keg+ +r ++ +++++f+qlea PON34215.1 161 RWPRQETLTLLEIRSRLNSRFKDTNQKGPLWDQISRIMaEEHGYQRSGKKCKEKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 246 8***********************************999*************************98..55667*****85 PP
2	trihelix	36.8	1.1e-11	475	550	1	74
trihelix 1 rWtkqevlaLiearremeerlrr..gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 rW ++e+ L+e+ ++ ++ + + Wee+++km gf r++ +Ckekwe+ + + + ++e +k+r+++ PON34215.1 475 RWNEKETSSLVELITSCNSLEVTsfQGTSVVVWEEIASKMVCLGFDRTAAECKEKWESFSVYVRMTNECKKNRRED 550 8*******9999976654443125688999******************************999999988533 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MDDHEYGGIP ADFRQLMAAA AARTEQQQQL IASSGRGHVA EPYSSSVQGR RVIMAHNDND 60 YLQQSYPTLG AGLVDHFGSG HHRNHNRFSV SSTTTTASNG VALYHHELES STSGGGGGGG 120 GGGGGSGGDG GGLWPINNSI GNYENNNYSY NYNEEGNNTS RWPRQETLTL LEIRSRLNSR 180 FKDTNQKGPL WDQISRIMAE EHGYQRSGKK CKEKFENLYK YYKKTKEGKA GRQDGKHYRF 240 FRQLEAIYGD QSINQPSVLE TYLGRNTLLH TELQSQELNH DHHQDPNKLS ESLSFSINNS 300 SEFETSSSDY NNDDRHDHSG IAPNLKMNNS KDHGLIMDQK MKGIIRPSRN KSSWKVKVEE 360 FVDSQMKKIM VTQETWMEKM LKSVIDKEEE RVAKEEEWRK QEAARFDQEV NEFWSKEKAW 420 VEARDAALMG ALNKFTSGNK GSSLLELPPF PERMLSRDHI TRKDTTSYVN YNNHRWNEKE 480 TSSLVELITS CNSLEVTSFQ GTSVVVWEEI ASKMVCLGFD RTAAECKEKW ESFSVYVRMT 540 NECKKNRRED YKTSGTGCYY FDHDSQDNRE GYHHDQGQSL KQGHDHQRIM GLQLMDEGIS 600 PSCNSNVGTS QMHPSNCFHL LFGEGENLWE KYGTMKLSKD KINQL

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MDDHEYGGIP ADFRQLMAAA AARTEQQQQL IASSGRGHVA EPYSSSVQGR RVIMAHNDND  60
YLQQSYPTLG AGLVDHFGSG HHRNHNRFSV SSTTTTASNG VALYHHELES STSGGGGGGG  120
GGGGGSGGDG GGLWPINNSI GNYENNNYSY NYNEEGNNTS RWPRQETLTL LEIRSRLNSR  180
FKDTNQKGPL WDQISRIMAE EHGYQRSGKK CKEKFENLYK YYKKTKEGKA GRQDGKHYRF  240
FRQLEAIYGD QSINQPSVLE TYLGRNTLLH TELQSQELNH DHHQDPNKLS ESLSFSINNS  300
SEFETSSSDY NNDDRHDHSG IAPNLKMNNS KDHGLIMDQK MKGIIRPSRN KSSWKVKVEE  360
FVDSQMKKIM VTQETWMEKM LKSVIDKEEE RVAKEEEWRK QEAARFDQEV NEFWSKEKAW  420
VEARDAALMG ALNKFTSGNK GSSLLELPPF PERMLSRDHI TRKDTTSYVN YNNHRWNEKE  480
TSSLVELITS CNSLEVTSFQ GTSVVVWEEI ASKMVCLGFD RTAAECKEKW ESFSVYVRMT  540
NECKKNRRED YKTSGTGCYY FDHDSQDNRE GYHHDQGQSL KQGHDHQRIM GLQLMDEGIS  600
PSCNSNVGTS QMHPSNCFHL LFGEGENLWE KYGTMKLSKD KINQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-90	Trihelix family protein