PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON34161.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 310aa    MW: 33311.2 Da    PI: 8.2785
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON34161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.14.7e-1499143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PON34161.1  99 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 143
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSLSTSANDS ASAADSGVGE IMLFGVRVVV DSMRKSVSLN NLSQYEQPQE VAVAVAVAGG  60
AGANNSSSSS NNAGAPGYIS ENDVVHNSGG NRERKRGIPW TEEEHKLFLL GLQKVGKGDW  120
RGISRNFVKT RTPTQVASHA QKYFLRRNNH NRRRRRSSLF DITTDTVTAI PMEEEQFHHQ  180
DNASQSLPSP MESCNPSGFS LLTTCPVTVS PAVLPAPIEN PIENLTLGQR IPENNAAAKL  240
VRPVALHSIP HGTTMTDLNL NLKSAIDPSP LSLKLALPTD PRESSSSSAR HSAFQSMSSF  300
NNGDSIITVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-52MYB_related family protein