PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON34152.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 723aa    MW: 79131.7 Da    PI: 6.6033
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON34152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox628.9e-2064119156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 r++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  PON34152.1  64 RKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 119
                 789999***********************************************998 PP
2START126.14.3e-402524231150
                 HHHHHHHHHHHHHHHHC-TT-EEEE...........EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
       START   1 elaeeaaqelvkkalaeepgWvkss...........esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                 ela +a++el+++a+a++p+Wv              e++n+de+l++f+++ +      ++ea+r+++vv+m++++lve+l+d++ qW++ +     +a
  PON34152.1 252 ELAVAAMEELIRMAQAGDPLWVPADysngtttttstEILNEDEYLRTFPRGIGpkplgMKSEASRETAVVIMNHTNLVEILMDVN-QWSTVFCgivsRA 349
                 57899*****************98889***********************999********************************.******99999** PP

                 EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSE CS
       START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpS 150
                 +t++ +s+g      galq+m+ae+q++splvp R+ +fvRy++q+ +g+w++vdvS+d+ ++ p      R +++pS
  PON34152.1 350 MTVDILSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHADGTWAVVDVSLDNLRPSPL----SRTRRRPS 423
                 ***************************************************************994....66667776 PP
3START24.74.8e-09424458172206
                 --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                 +++r +h+++++lv+sg+a+gak+wva+l+rqce+
  PON34152.1 424 VDDRAVHNIYKPLVNSGIAFGAKRWVAALDRQCER 458
                 57899****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    
MYQPKLFETP HHHLVDISHK SNASESDQLG IKMRDDDLET KSGTDLIEAP LSGDEQDPSQ  60
RSKRKRYHRH TQRQIQEMEA FFKECPHPDD KQRKELSREL GLEPLQVKFW FQNKRTQMKA  120
HHERHENAIL KAENEKLRAE NNRYKEALSN ATCPNCGGPA ALGEMSFDEQ HLRIENARLR  180
EEIDRISGIA AKYVGKPLSS LSHLPSSRSL DHIGFGNFGS RSGFVGEMFG AASDLLRSVS  240
VPTEADKPII VELAVAAMEE LIRMAQAGDP LWVPADYSNG TTTTTSTEIL NEDEYLRTFP  300
RGIGPKPLGM KSEASRETAV VIMNHTNLVE ILMDVNQWST VFCGIVSRAM TVDILSTGVA  360
GNYNGALQVM TAEFQVPSPL VPTRENYFVR YCKQHADGTW AVVDVSLDNL RPSPLSRTRR  420
RPSVDDRAVH NIYKPLVNSG IAFGAKRWVA ALDRQCERLA SSMANNIPAG DLCVITSPEG  480
RKSMLKLAER MVMSFCVGVG ASTAHAWTTL SATGSDDVRV MTRKSTDDPG RPPGIVLSAA  540
TSFWLPVRPK QVFDFLRDEN SRSKWDILSN GGLVQEMAHI ANGRDPGNCV SLLRVNSANS  600
SQSNMLILQE SCTDPTGSYV IYAPVDIVAM NVVLSGGDPD YVALLPSGFA ILPDGPASGP  660
INNGPGGILE VGSGGSLLTV AFQILVDSAP TAKLSLGSVA TVNNLIKCTV ERIRAAVTSE  720
NVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein