PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON33920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 204aa MW: 23208.9 Da PI: 9.2969 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 76.9 | 1.5e-24 | 10 | 56 | 2 | 48 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 rien rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs++gkly+ PON33920.1 10 RIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSTHGKLYD 56 8********************************************97 PP | |||||||
2 | K-box | 40 | 1.7e-14 | 77 | 168 | 8 | 99 |
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s +++a++++ q ++L ++ e + + + G + ++++l eLq Le++Le + +iRs+K +++ ++i+ l+ ke l+ +nk+L+ k+e PON33920.1 77 SlQAQADQQQAIQTKSQLDANEEIIMLK-QYMFGGGAGTMTLDELQVLEKNLELWIYQIRSTKLDIMSREIQLLRDKEGILKAANKYLQDKIE 168 3355555666666666666655555554.7899*********************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MARGKIQLRR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFST HGKLYDLATK 60 GTMQGLIERY MKSTRGSLQA QADQQQAIQT KSQLDANEEI IMLKQYMFGG GAGTMTLDEL 120 QVLEKNLELW IYQIRSTKLD IMSREIQLLR DKEGILKAAN KYLQDKIEVN STAITDLDFA 180 PMITNNIPYP LTVIQNEIYF SSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 6e-73 | MIKC_MADS family protein |