PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33671.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 724aa    MW: 78961.6 Da    PI: 6.687
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.9e-203186156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++t++q++ Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  PON33671.1 31 KKRYHRHTAHQIQKLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 86
                678899***********************************************998 PP
2START190.21e-592314562206
                 HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
       START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                 +a  a++el+++ + +ep+W+ks+     + +n d + ++f+++++       ++ea+r+sgvv+m+   lv+ ++d + +W e ++     a t+e i
  PON33671.1 231 IAANAMEELLRLLQTNEPLWMKSAagdgrDVLNLDGYERIFPRANShlknpnLRIEASRDSGVVIMNGLALVAMFMDPN-KWVELFPtivsMARTIEII 328
                 67889************************9*************999*********************************.******9999999****** PP

                 CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
       START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                 ssg      g lqlm  elq+lsplvp R+f+f+Ry++q ++g w+ivdvS d +++++  +s  R+++lpSg+li++++ng+skv+wvehv+ ++++p
  PON33671.1 329 SSGvlgnhsGSLQLMHEELQVLSPLVPtREFYFLRYCQQIEQGLWAIVDVSYDFPRDNQ-FASQFRSHRLPSGCLIQDMPNGYSKVIWVEHVEIEDKSP 426
                 **********************************************************9.8************************************** PP

                 .HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 178 .hwllrslvksglaegaktwvatlqrqcek 206
                  h l+r l+++gla+ga +w+atlqr ce+
  PON33671.1 427 tHRLYRDLIHNGLAFGAERWLATLQRMCER 456
                 ****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    
MEFASGGGGG SGGGGGGGGG DNDASDPQRR KKRYHRHTAH QIQKLESMFK ECPHPDEKQR  60
LQLSRELGLA PRQIKFWFQN RRTQMKAQHE RADNCALRAE NDKIRCENIA IREALKNVIC  120
PSCGGPPINE DSYFDEQKLR MENAQLKEEL DRVSSIAAKY IGRPISQLPP VQPVHISSLD  180
LSMASFGAHG MGVGGPSLDL DLLPGCSSTI PTLPYQPPGI SDMDKSLMSD IAANAMEELL  240
RLLQTNEPLW MKSAAGDGRD VLNLDGYERI FPRANSHLKN PNLRIEASRD SGVVIMNGLA  300
LVAMFMDPNK WVELFPTIVS MARTIEIISS GVLGNHSGSL QLMHEELQVL SPLVPTREFY  360
FLRYCQQIEQ GLWAIVDVSY DFPRDNQFAS QFRSHRLPSG CLIQDMPNGY SKVIWVEHVE  420
IEDKSPTHRL YRDLIHNGLA FGAERWLATL QRMCERFACL MVSGTSTRDL GGVIPSPDGK  480
RSMMKLAQRM VNNFCASIST SNGHRWTTLS GLNDVGVRVT VHKSTDPGQP NGVVLSAVTN  540
IWLPISPQDV FNFFKDERTR SQWDVLSNGN AVQEVAHIAN GSHPGNCISV LRAFNTSQNN  600
MLILQESCID SSGSLVVYCP VDLPAINIAM SGEDPSYIPL LPSGFTISPD GRLDQGGGGG  660
GGDGASTSAA PTGRSGGSLI TVAFQILVSS LPSAKLNLES VTTVNNLIGT TVQQIKAALN  720
CPTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein