PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON33556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | GeBP | ||||||||
Protein Properties | Length: 230aa MW: 26219.5 Da PI: 4.944 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 73.2 | 4.7e-23 | 40 | 134 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 +qrl eeDei++LqGl +f +k+g + + i++f++ + +s+ +vs++ql + +K+Kf++k+ k +++++p+f++ hdqk++elsk+iWg PON33556.1 40 SSQRLLGEEDEILVLQGLTEFYEKNGNN--STISEFCNVMASSLGENVSQKQLNHIVCCMKRKFEDKEMKiCDDDESPAFASLHDQKVYELSKMIWG 134 589***********************66..679********************************999886889999*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEDPYNSIVP DSVDEYEPNP KKSKFSADEK MKRVADASSS SQRLLGEEDE ILVLQGLTEF 60 YEKNGNNSTI SEFCNVMASS LGENVSQKQL NHIVCCMKRK FEDKEMKICD DDESPAFASL 120 HDQKVYELSK MIWGNRITTT TTTTTTTDVA AAAADSDANN EDRLGMLFYD YYSRHGLNLD 180 LFEESKGIYL AKRWVKFKVS ECKYLIQRSK FEAKMQNVKL QAYKKESVGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 4e-13 | GeBP family protein |