PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON33262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 207aa MW: 23740.9 Da PI: 9.2218 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.9e-17 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT eEd++l+++++ +G+ Wk+ a + g+ R++k+c++rw +yl PON33262.1 18 RGIWTLEEDQKLAQVIEIHGPTKWKSLAVKAGLSRCGKSCRLRWMNYL 65 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.7 | 4.1e-16 | 71 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l PON33262.1 71 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 116 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MSMATSSSTQ RAKEEKNRGI WTLEEDQKLA QVIEIHGPTK WKSLAVKAGL SRCGKSCRLR 60 WMNYLRPNIK RGNISDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWNSHLSKKI 120 KQMERPNTSA TLTALESHLP EMNTKMKEGD HDHECPKQIT TESTTPKGSH HGKSKSGFLG 180 EEPLNLEWSN FLEVDESWFC FAGSYNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 7e-55 | MYB family protein |