PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33015.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 345aa    MW: 38356.8 Da    PI: 8.2789
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000266082123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  PON33015.1 60 YSCSFCRREFRSAQALGGHMNVH 82
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEEARHWVWA KRKHGLISPH HDLLVPKIPS SSYNDSWEEQ AFAEDAAGPL GGCIWPPRSY  60
SCSFCRREFR SAQALGGHMN VHRRDRARLK QSPDLHHHEI VHQNHHQPHN NTSIPLHYQN  120
PLITTTTTTS TSTSLGPGHY GPSQVCALVY NPNPNSDPAG LFPPPSSSPS CNKLQNCEKQ  180
AALLFPPYFS SSLVLENNKR SNNSTSTACP MNPFPQSWPN LATDKYYRDS IHKDHIGDQK  240
KISSITLESG SCRSTTKVDY VKSTTDLSVS LNLVVCHAFP TSESGTGGKD QEAVPSCKRR  300
RIEPYSSVPY PLKPSSAESE AFQLGPRSID DLDLELRLGD RPKVK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1298302KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.14e-27C2H2 family protein