PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON33014.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 253aa    MW: 28303.8 Da    PI: 4.9307
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON33014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000112345123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ Fs+   L  H++ H
  PON33014.1 23 YTCTFCKRGFSNAQALGGHMNIH 45
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDKFGPIKWG SEDQTGSGQP KSYTCTFCKR GFSNAQALGG HMNIHRRDRA IIRQKFSDQE  60
SQQVNSSETS TSVPKNPPPD HDDDNNNNIN INIDVNNALS SSEDQRSSST VISTSTHDQR  120
RASNSSQLEV LLTSTEQQSG EVVLNNNPYH VNSLKMMMRS EYDQYDHHAD DHDEQHSVAA  180
AARGKFVIGG AEEANAIRRQ IPFFIKELVA EDGVVARREQ EEELDLELRL GVDRQEAVTT  240
TTTTTTLSTK EFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-15C2H2 family protein