PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32940.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 501aa MW: 54544.2 Da PI: 6.1967

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.8	8.3e-16	320	371	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PON32940.1 320 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 371 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MAPATNWLSF SLSPLEMLRS SSDQSPFMAY DSSTASQYLL DNFYANGWTN QKSQVFFSEG 60 EGKESQAARI GDPPILTSFI HPHTQNHHPV PKLEDFLGDS SSSMVRYSDS QTETHDSSLT 120 QIYDQGSAPS YFNDHHDLKA VTAFQAFSTN SGSEVDDSAS VPRTAQLTCA EFTGGGGGGG 180 GAHSIESTGN ELGFPSCPTG SLSLGVTMTQ SSERAIVRVD SDSSKKISDS FGQRTSIYRG 240 VTRTCLGLVD KDVYLGGYDK EEKAARAYDL AALKYWGPTA TTNFPVSNYT KELEEMKHVT 300 KQEFIASLRR KSSGFSRGAS IYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFATEEEAAE 360 AYDIAAIKFR GVNAVTNFEM NRYDVEAIAK SALPVGGAAK RLKLSLEAEE KPSIKHDQQA 420 CSNSSTTSSN NNINFSALQP VSTIPCGIPF DAATAALYHQ NLFHHFQSNY IGNTDAAGSS 480 PAMTTMIPQP AEFFIWPHQS Y

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MAPATNWLSF SLSPLEMLRS SSDQSPFMAY DSSTASQYLL DNFYANGWTN QKSQVFFSEG  60
EGKESQAARI GDPPILTSFI HPHTQNHHPV PKLEDFLGDS SSSMVRYSDS QTETHDSSLT  120
QIYDQGSAPS YFNDHHDLKA VTAFQAFSTN SGSEVDDSAS VPRTAQLTCA EFTGGGGGGG  180
GAHSIESTGN ELGFPSCPTG SLSLGVTMTQ SSERAIVRVD SDSSKKISDS FGQRTSIYRG  240
VTRTCLGLVD KDVYLGGYDK EEKAARAYDL AALKYWGPTA TTNFPVSNYT KELEEMKHVT  300
KQEFIASLRR KSSGFSRGAS IYRGVTRHHQ QGRWQARIGR VAGNKDLYLG TFATEEEAAE  360
AYDIAAIKFR GVNAVTNFEM NRYDVEAIAK SALPVGGAAK RLKLSLEAEE KPSIKHDQQA  420
CSNSSTTSSN NNINFSALQP VSTIPCGIPF DAATAALYHQ NLFHHFQSNY IGNTDAAGSS  480
PAMTTMIPQP AEFFIWPHQS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-164	AP2 family protein