PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON32807.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 398aa MW: 43274.5 Da PI: 6.2941

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON32807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.6e-17	51	96	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + PON32807.1 51 KGPWSPEEDAILSRLVSKFGARNWSLIARGIS-GRSGKSCRLRWCNQ 96 79****************************.*********985 PP
2	Myb_DNA-binding	58	2.1e-18	103	147	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r++++ eEd+++v a++ +G++ W++Iar ++ gRt++ +k++w++ PON32807.1 103 RKPFSDEEDQIIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 147 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
METNNNEATT LATELDADEL AALGCSGDEA TATGEDGGGG GGKRAGRDRV KGPWSPEEDA 60 ILSRLVSKFG ARNWSLIARG ISGRSGKSCR LRWCNQLDPA VKRKPFSDEE DQIIVAAHAI 120 HGNKWAAIAR LLPGRTDNAI KNHWNSTLRR RCMDRGKVKL EPGHIVEDIS FDKTKASSEE 180 TMSCGDVNSF KSIEGRDLSG ADHMADHNEV FLPTEGYFSY EVQEPPTLFR PVARVSAFSV 240 YNHLDGQQPL SSIRRPVPMQ GPLVQASKPD IEVFKLLEAD YGGTSVPHQC GHGCCGMQNG 300 KSPQNSLLGP DFVDFSEPPA FPSFELAAIA TDISNLAWLK SGLENSSVRA MGDAAGRIIS 360 NGSQMKMGHF EESRTGNHLL FEERRGNLMS MKTNVLST

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

METNNNEATT LATELDADEL AALGCSGDEA TATGEDGGGG GGKRAGRDRV KGPWSPEEDA  60
ILSRLVSKFG ARNWSLIARG ISGRSGKSCR LRWCNQLDPA VKRKPFSDEE DQIIVAAHAI  120
HGNKWAAIAR LLPGRTDNAI KNHWNSTLRR RCMDRGKVKL EPGHIVEDIS FDKTKASSEE  180
TMSCGDVNSF KSIEGRDLSG ADHMADHNEV FLPTEGYFSY EVQEPPTLFR PVARVSAFSV  240
YNHLDGQQPL SSIRRPVPMQ GPLVQASKPD IEVFKLLEAD YGGTSVPHQC GHGCCGMQNG  300
KSPQNSLLGP DFVDFSEPPA FPSFELAAIA TDISNLAWLK SGLENSSVRA MGDAAGRIIS  360
NGSQMKMGHF EESRTGNHLL FEERRGNLMS MKTNVLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-107	MYB family protein